RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
NPC1-204ENST00000586718 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
NPC1-204ENST00000586718 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
NPC1-204ENST00000586718 LAMTOR2Q9Y2Q5 125 aa6.16□□□□□ -1.42
NPC1-204ENST00000586718 A0A087WWL8 130 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 LYRM9A8MSI8 78 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 F5H697 171 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 PHOX2AO14813 284 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 NCR2O95944 276 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 RAB4AP20338 218 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 EMP1P54849 157 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 OR10J3Q5JRS4 329 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 BAGE3Q86Y29 109 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 PRELID3AQ96N28 172 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 ALKBH7Q9BT30 221 aaPredicted RBP6.15□□□□□ -1.42
NPC1-204ENST00000586718 NOP10Q9NPE3 64 aaKnown RBP6.15□□□□□ -1.42
NPC1-204ENST00000586718 X6R8D5 127 aa6.15□□□□□ -1.42
NPC1-204ENST00000586718 MUC4Q99102 2169 aa6.15□□□□□ -1.43
NPC1-204ENST00000586718 TRGV2A0A075B6R0 118 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 TRAV4A0A0B4J268 109 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 K7EIL1 84 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 RS1O15537 224 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 CIDEAO60543 219 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 PRM2P04554 102 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 NDUFA6P56556 154 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 Q6ZTI0 123 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 RASL10AQ92737 203 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 RNF185Q96GF1 192 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 MAP1LC3AQ9H492 121 aa6.14□□□□□ -1.43
NPC1-204ENST00000586718 GAGE12BA1L429 117 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 GAGE7O76087 117 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 PRB2P02812 416 aaPredicted RBP6.13□□□□□ -1.43
NPC1-204ENST00000586718 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 Q0VG73 95 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 CFAP126Q5VTH2 177 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 SUMO4Q6EEV6 95 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 ZFP2Q6ZN57 461 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 C18orf32Q8TCD1 76 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 U3KQK5 164 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
NPC1-204ENST00000586718 TRAV26-2A0A0B4J265 109 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 PLAC8L1A1L4L8 177 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 PMCHP20382 165 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 S100A2P29034 98 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 RNASEKQ6P5S7 137 aaKnown RBP6.12□□□□□ -1.43
NPC1-204ENST00000586718 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 Q8NAQ8 132 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 JPT2Q9H910 190 aa6.12□□□□□ -1.43
NPC1-204ENST00000586718 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
NPC1-204ENST00000586718 HSBP1O75506 76 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 TNFRSF6BO95407 300 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 NPYP01303 97 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 CRYGDP07320 174 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 DEFB130BP0DP73 79 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 DEFB130AP0DP74 79 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 DAD1P61803 113 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 IQCJQ1A5X6 159 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 COA6Q5JTJ3 125 aaKnown RBP6.11□□□□□ -1.43
NPC1-204ENST00000586718 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 PRSS3P2Q8NHM4 247 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 SAMD10Q9BYL1 202 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 C11orf68Q9H3H3 251 aaKnown RBP6.11□□□□□ -1.43
NPC1-204ENST00000586718 ZMAT4Q9H898 229 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 EDA2RQ9HAV5 297 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 ST20Q9HBF5 79 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 RETNQ9HD89 108 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
NPC1-204ENST00000586718 NBEAL2Q6ZNJ1 2754 aa6.11□□□□□ -1.43
NPC1-204ENST00000586718 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 TRGV4A0A0C4DH28 118 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 K7EQD1 137 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 SERF1AO75920 110 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 LINC00315P59091 139 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
NPC1-204ENST00000586718 SNRPEP62304 92 aaKnown RBP6.1□□□□□ -1.43
NPC1-204ENST00000586718 NRACQ8N912 160 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
NPC1-204ENST00000586718 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 SMIM2Q9BVW6 85 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 NACAE9PAV3 2078 aa6.1□□□□□ -1.43
NPC1-204ENST00000586718 LOC389332A0A1B0GUA5 103 aa6.09□□□□□ -1.43
NPC1-204ENST00000586718 DEFB4AO15263 64 aa6.09□□□□□ -1.43
NPC1-204ENST00000586718 TCAPO15273 167 aa6.09□□□□□ -1.43
NPC1-204ENST00000586718 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 395.8 ms