RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 IGHV3-30-3P0DP02 117 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 IGHV3-30-5P0DP03 117 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 LELP1Q5T871 98 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 EIF5AL1Q6IS14 154 aaKnown RBP18.96■□□□□ 0.63
LIG3-208ENST00000586407 SFRP2Q96HF1 295 aa18.96■□□□□ 0.63
LIG3-208ENST00000586407 NFE4Q86UQ8 179 aa18.95■□□□□ 0.62
LIG3-208ENST00000586407 ZFP82Q8N141 532 aa18.95■□□□□ 0.62
LIG3-208ENST00000586407 Q8N3U1 123 aa18.95■□□□□ 0.62
LIG3-208ENST00000586407 C11orf52Q96A22 123 aa18.95■□□□□ 0.62
LIG3-208ENST00000586407 MUC21A0A0G2JKD1 596 aa18.94■□□□□ 0.62
LIG3-208ENST00000586407 MUC21A0A140T8X8 626 aa18.94■□□□□ 0.62
LIG3-208ENST00000586407 OR10AG1Q8NH19 301 aa18.94■□□□□ 0.62
LIG3-208ENST00000586407 RHODO00212 210 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 ERVFC1-1P60608 527 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 LINC01556Q5JQF7 62 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 AKAP14Q86UN6 197 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 SLC51BQ86UW2 128 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 LRP1BQ9NZR2 4599 aa18.93■□□□□ 0.62
LIG3-208ENST00000586407 CENPWQ5EE01 88 aa18.92■□□□□ 0.62
LIG3-208ENST00000586407 C10orf126Q8N4M7 172 aa18.92■□□□□ 0.62
LIG3-208ENST00000586407 RYR1P21817 5038 aa18.92■□□□□ 0.62
LIG3-208ENST00000586407 K7EP13 123 aa18.91■□□□□ 0.62
LIG3-208ENST00000586407 C9orf62Q8N4C0 152 aa18.91■□□□□ 0.62
LIG3-208ENST00000586407 A0A087WTM6 91 aa18.9■□□□□ 0.62
LIG3-208ENST00000586407 RAB19A4D1S5 217 aa18.9■□□□□ 0.62
LIG3-208ENST00000586407 SSTP61278 116 aa18.9■□□□□ 0.62
LIG3-208ENST00000586407 Q9HAA7 133 aa18.9■□□□□ 0.62
LIG3-208ENST00000586407 TEX46H3BTG2 121 aa18.89■□□□□ 0.61
LIG3-208ENST00000586407 IGLV2-8P01709 118 aa18.88■□□□□ 0.61
LIG3-208ENST00000586407 MEF2BQ02080 365 aaPredicted RBP18.87■□□□□ 0.61
LIG3-208ENST00000586407 KRTAP4-5Q9BYR2 181 aa18.87■□□□□ 0.61
LIG3-208ENST00000586407 IBA57-AS1B1ANH7 110 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 EREGO14944 169 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 SNAI2O43623 268 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 CDK2AP2O75956 126 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 CXCL1P09341 107 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 GZMBP10144 247 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 BCL2P10415 239 aa18.86■□□□□ 0.61
LIG3-208ENST00000586407 DNAH5Q8TE73 4624 aa18.84■□□□□ 0.61
LIG3-208ENST00000586407 HSPG2P98160 4391 aa18.84■□□□□ 0.61
LIG3-208ENST00000586407 IFNA1P01562 189 aa18.84■□□□□ 0.61
LIG3-208ENST00000586407 SSBP4Q9BWG4 385 aaPredicted RBP18.84■□□□□ 0.61
LIG3-208ENST00000586407 MED9Q9NWA0 146 aa18.84■□□□□ 0.61
LIG3-208ENST00000586407 TRBV20OR9-2A0A075B6H5 130 aa18.83■□□□□ 0.6
LIG3-208ENST00000586407 OR5AL1P0C617 328 aa18.83■□□□□ 0.6
LIG3-208ENST00000586407 ZNF56Q15929 161 aa18.83■□□□□ 0.6
LIG3-208ENST00000586407 SPANXN1Q5VSR9 72 aa18.83■□□□□ 0.6
LIG3-208ENST00000586407 RBFOX3A6NFN3 312 aa18.82■□□□□ 0.6
LIG3-208ENST00000586407 GNG4P50150 75 aa18.82■□□□□ 0.6
LIG3-208ENST00000586407 PSCAO43653 123 aa18.81■□□□□ 0.6
LIG3-208ENST00000586407 PDE6DO43924 150 aa18.81■□□□□ 0.6
LIG3-208ENST00000586407 ALKAL2Q6UX46 152 aa18.81■□□□□ 0.6
LIG3-208ENST00000586407 DAZ4Q86SG3 579 aaKnown RBP18.81■□□□□ 0.6
LIG3-208ENST00000586407 DAZ3Q9NR90 486 aaKnown RBP18.81■□□□□ 0.6
LIG3-208ENST00000586407 OR2D3Q8NGH3 330 aa18.8■□□□□ 0.6
LIG3-208ENST00000586407 TPPP3Q9BW30 176 aa18.8■□□□□ 0.6
LIG3-208ENST00000586407 VAX2Q9UIW0 290 aa18.8■□□□□ 0.6
LIG3-208ENST00000586407 C19orf71A6NCJ1 209 aa18.79■□□□□ 0.6
LIG3-208ENST00000586407 MAPKAPK5-AS1Q8N8E1 139 aa18.79■□□□□ 0.6
LIG3-208ENST00000586407 DAZAP1Q96EP5 407 aaKnown RBP18.79■□□□□ 0.6
LIG3-208ENST00000586407 PGPEP1Q9NXJ5 209 aa18.79■□□□□ 0.6
LIG3-208ENST00000586407 A0A087WWC5 75 aa18.78■□□□□ 0.6
LIG3-208ENST00000586407 A0A1B0GVG6 124 aa18.78■□□□□ 0.6
LIG3-208ENST00000586407 NKX2-5P52952 324 aaPredicted RBP18.78■□□□□ 0.6
LIG3-208ENST00000586407 UBE2D3P61077 147 aa18.78■□□□□ 0.6
LIG3-208ENST00000586407 UBE2D2P62837 147 aa18.78■□□□□ 0.6
LIG3-208ENST00000586407 RPL36AP83881 106 aaKnown RBP18.78■□□□□ 0.6
LIG3-208ENST00000586407 RPL36ALQ969Q0 106 aaKnown RBP18.78■□□□□ 0.6
LIG3-208ENST00000586407 BOLA1Q9Y3E2 137 aa18.78■□□□□ 0.6
LIG3-208ENST00000586407 APOBP04114 4563 aaKnown RBP18.77■□□□□ 0.6
LIG3-208ENST00000586407 TRBV10-1A0A0K0K1A3 114 aa18.77■□□□□ 0.6
LIG3-208ENST00000586407 RAB4BP61018 213 aa18.77■□□□□ 0.6
LIG3-208ENST00000586407 NEXN-AS1Q8NBZ9 246 aa18.77■□□□□ 0.6
LIG3-208ENST00000586407 PCLOQ9Y6V0 5065 aa18.76■□□□□ 0.59
LIG3-208ENST00000586407 LRCOL1A6NCL2 159 aa18.76■□□□□ 0.59
LIG3-208ENST00000586407 IGLC6P0CF74 106 aa18.76■□□□□ 0.59
LIG3-208ENST00000586407 TRBV7-3A0A075B6L6 115 aa18.75■□□□□ 0.59
LIG3-208ENST00000586407 F5H697 171 aa18.75■□□□□ 0.59
LIG3-208ENST00000586407 FER1L6-AS1Q8NA97 138 aa18.75■□□□□ 0.59
LIG3-208ENST00000586407 KIF25-AS1Q9Y6Z4 181 aa18.75■□□□□ 0.59
LIG3-208ENST00000586407 KRTAP10-1P60331 282 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 LAGE3Q14657 143 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 CDPF1Q6NVV7 123 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 NIT1Q86X76 327 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 OR10G8Q8NGN5 311 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 DNAJC30Q96LL9 226 aa18.74■□□□□ 0.59
LIG3-208ENST00000586407 P01737 135 aa18.73■□□□□ 0.59
LIG3-208ENST00000586407 RPS20P60866 119 aaKnown RBP18.73■□□□□ 0.59
LIG3-208ENST00000586407 SMIM12Q96EX1 92 aa18.73■□□□□ 0.59
LIG3-208ENST00000586407 AP1S3Q96PC3 154 aa18.73■□□□□ 0.59
LIG3-208ENST00000586407 WFDC2Q14508 124 aa18.71■□□□□ 0.59
LIG3-208ENST00000586407 MGPP08493 103 aa18.7■□□□□ 0.58
LIG3-208ENST00000586407 SMIM17P0DL12 118 aa18.7■□□□□ 0.58
LIG3-208ENST00000586407 NUDT10Q8NFP7 164 aa18.7■□□□□ 0.58
LIG3-208ENST00000586407 NUDT11Q96G61 164 aa18.7■□□□□ 0.58
LIG3-208ENST00000586407 TAGLN2P37802 199 aaKnown RBP18.69■□□□□ 0.58
LIG3-208ENST00000586407 BLOC1S1P78537 153 aa18.69■□□□□ 0.58
LIG3-208ENST00000586407 KLK12Q9UKR0 248 aa18.69■□□□□ 0.58
LIG3-208ENST00000586407 URGCP-MRPS24S4R325 110 aa18.69■□□□□ 0.58
LIG3-208ENST00000586407 K7EN84 100 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms