RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 P0DMU3 169 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 FHL2Q14192 279 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 ZNF56Q15929 161 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 ZFP2Q6ZN57 461 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 TSKUQ8WUA8 353 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 PGLYRP4Q96LB8 373 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-215ENST00000584944 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 FRAS1Q86XX4 4008 aa9.74□□□□□ -0.85
TRAF4-215ENST00000584944 H3BNG1 76 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 LY6G6CO95867 125 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 IGLC6P0CF74 106 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 RHOHQ15669 191 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 NDUFA5Q16718 116 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
TRAF4-215ENST00000584944 FAM231BA6NCW3 169 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 HIGD1CA8MV81 97 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 MGPP08493 103 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 GYPEP15421 78 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 SRIP30626 198 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 CTRLP40313 264 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 CRYBA4P53673 196 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 CCL18P55774 89 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
TRAF4-215ENST00000584944 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-215ENST00000584944 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 JPT2Q9H910 190 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
TRAF4-215ENST00000584944 NXPH4O95158 308 aa9.71□□□□□ -0.86
TRAF4-215ENST00000584944 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-215ENST00000584944 NTF3P20783 257 aa9.71□□□□□ -0.86
TRAF4-215ENST00000584944 WDR73Q6P4I2 378 aa9.71□□□□□ -0.86
TRAF4-215ENST00000584944 SH2D6Q7Z4S9 175 aa9.71□□□□□ -0.86
TRAF4-215ENST00000584944 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-215ENST00000584944 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
TRAF4-215ENST00000584944 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 RIGQ13278 110 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 GTSF1Q8WW33 167 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 V9GYV3 84 aa9.7□□□□□ -0.86
TRAF4-215ENST00000584944 H7C1H1 209 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 K7EQD1 137 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 RAB4BP61018 213 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
TRAF4-215ENST00000584944 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
TRAF4-215ENST00000584944 RNF212Q495C1 297 aa9.68□□□□□ -0.86
TRAF4-215ENST00000584944 LGALS9CQ6DKI2 356 aa9.68□□□□□ -0.86
TRAF4-215ENST00000584944 DPH3P1Q9H4G8 78 aa9.68□□□□□ -0.86
TRAF4-215ENST00000584944 MSRB1Q9NZV6 116 aa9.68□□□□□ -0.86
TRAF4-215ENST00000584944 MUC4Q99102 2169 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 A0A096LPF7 62 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 S100A8P05109 93 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 CRYGDP07320 174 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 EVI2AP22794 236 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
TRAF4-215ENST00000584944 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
TRAF4-215ENST00000584944 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
TRAF4-215ENST00000584944 GAGE1Q13065 139 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 GAGE4Q13068 117 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 GAGE5Q13069 117 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
TRAF4-215ENST00000584944 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
TRAF4-215ENST00000584944 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 A0A1B0GW15 77 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 APOC3P02656 99 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 S100PP25815 95 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 CTDSP1Q9GZU7 261 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.86
TRAF4-215ENST00000584944 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 CAMPP49913 170 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
TRAF4-215ENST00000584944 UFSP1Q6NVU6 142 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 Q6ZSN1 163 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 SVBPQ8N300 66 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
TRAF4-215ENST00000584944 SNAPINO95295 136 aa9.63□□□□□ -0.87
TRAF4-215ENST00000584944 RHEBQ15382 184 aa9.63□□□□□ -0.87
TRAF4-215ENST00000584944 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
TRAF4-215ENST00000584944 RPS10P5Q9NQ39 176 aa9.63□□□□□ -0.87
TRAF4-215ENST00000584944 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
TRAF4-215ENST00000584944 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
TRAF4-215ENST00000584944 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
TRAF4-215ENST00000584944 HBBP68871 147 aa9.62□□□□□ -0.87
TRAF4-215ENST00000584944 MRPL54Q6P161 138 aaKnown RBP9.62□□□□□ -0.87
TRAF4-215ENST00000584944 TRAV8-6A0A0B4J262 113 aa9.61□□□□□ -0.87
TRAF4-215ENST00000584944 ESRGQ1W209 222 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms