RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 RHODO00212 210 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 SNAI2O43623 268 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 PDE6DO43924 150 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 Q8N1X5 172 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-221ENST00000584888 VAX2Q9UIW0 290 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
ERBB2-221ENST00000584888 IFNA1P01562 189 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 CENPWQ5EE01 88 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 ZFP82Q8N141 532 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 LYPD6BQ8NI32 183 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 SMIM12Q96EX1 92 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
ERBB2-221ENST00000584888 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 TRAV9-2A0A087WT02 112 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 M0R381 172 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
ERBB2-221ENST00000584888 PRR27Q6MZM9 219 aa12.05□□□□□ -0.48
ERBB2-221ENST00000584888 A0A087WWL8 130 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 LELP1Q5T871 98 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 ALKAL2Q6UX46 152 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
ERBB2-221ENST00000584888 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 EVI2AP22794 236 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 NKX2-5P52952 324 aaPredicted RBP12.03□□□□□ -0.48
ERBB2-221ENST00000584888 BLOC1S1P78537 153 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 GAGE1Q13065 139 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 GAGE4Q13068 117 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 GAGE5Q13069 117 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
ERBB2-221ENST00000584888 EREGO14944 169 aa12.02□□□□□ -0.49
ERBB2-221ENST00000584888 FUSP35637 526 aaKnown RBP eCLIP12.02□□□□□ -0.49
ERBB2-221ENST00000584888 GNG4P50150 75 aa12.02□□□□□ -0.49
ERBB2-221ENST00000584888 ERVFC1-1P60608 527 aa12.02□□□□□ -0.49
ERBB2-221ENST00000584888 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
ERBB2-221ENST00000584888 DNAH5Q8TE73 4624 aa12.02□□□□□ -0.49
ERBB2-221ENST00000584888 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
ERBB2-221ENST00000584888 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
ERBB2-221ENST00000584888 MSRB1Q9NZV6 116 aa12.01□□□□□ -0.49
ERBB2-221ENST00000584888 OR10J3Q5JRS4 329 aa12□□□□□ -0.49
ERBB2-221ENST00000584888 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
ERBB2-221ENST00000584888 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
ERBB2-221ENST00000584888 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
ERBB2-221ENST00000584888 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
ERBB2-221ENST00000584888 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
ERBB2-221ENST00000584888 RAB4BP61018 213 aa11.99□□□□□ -0.49
ERBB2-221ENST00000584888 KIF25-AS1Q9Y6Z4 181 aa11.99□□□□□ -0.49
ERBB2-221ENST00000584888 A0A087WTM6 91 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 RBFOX3A6NFN3 312 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 GZMBP10144 247 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 SPANXN1Q5VSR9 72 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 OR2D3Q8NGH3 330 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 OR10G8Q8NGN5 311 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
ERBB2-221ENST00000584888 BIN3Q9NQY0 253 aa11.98□□□□□ -0.49
ERBB2-221ENST00000584888 TMEM250H0YL14 139 aa11.97□□□□□ -0.49
ERBB2-221ENST00000584888 OCC1Q8TAD7 63 aa11.97□□□□□ -0.49
ERBB2-221ENST00000584888 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
ERBB2-221ENST00000584888 A0A087WWC5 75 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 K7EN84 100 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
ERBB2-221ENST00000584888 UBE2D3P61077 147 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 UBE2D2P62837 147 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 FER1L6-AS1Q8NA97 138 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
ERBB2-221ENST00000584888 TRBV7-3A0A075B6L6 115 aa11.95□□□□□ -0.5
ERBB2-221ENST00000584888 P01737 135 aa11.95□□□□□ -0.5
ERBB2-221ENST00000584888 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
ERBB2-221ENST00000584888 Q8N3U1 123 aa11.94□□□□□ -0.5
ERBB2-221ENST00000584888 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
ERBB2-221ENST00000584888 RPL36ALQ969Q0 106 aaKnown RBP11.94□□□□□ -0.5
ERBB2-221ENST00000584888 XKRY2A2RUG3 117 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 F2Z2F3 143 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 XGP55808 180 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 KRTAP10-1P60331 282 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 SSTP61278 116 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 CACNG7P62955 275 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 WDR73Q6P4I2 378 aa11.93□□□□□ -0.5
ERBB2-221ENST00000584888 EPM2AB3EWF7 344 aa11.92□□□□□ -0.5
ERBB2-221ENST00000584888 LAGE3Q14657 143 aa11.92□□□□□ -0.5
ERBB2-221ENST00000584888 ZNF56Q15929 161 aa11.92□□□□□ -0.5
ERBB2-221ENST00000584888 LYZL1Q6UWQ5 148 aa11.92□□□□□ -0.5
ERBB2-221ENST00000584888 AP1S3Q96PC3 154 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 685.2 ms