RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF345Q14585 488 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 FAM162BQ5T6X4 162 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 CST9LP1Q5W188 147 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 COX8CQ7Z4L0 72 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
CCDC47-206ENST00000584112 TRBV6-1A0A0K0K1D8 114 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 KRBOX1C9JBD0 128 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 H3BVH4 76 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 SH2D1AO60880 128 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 AKR1C3P42330 323 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 LAGE3Q14657 143 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 KCNRGQ8N5I3 272 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 OR11H4Q8NGC9 324 aa7.46□□□□□ -1.22
CCDC47-206ENST00000584112 UMAD1C9J7I0 102 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 M0R036 132 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 IGHV3-30P01768 117 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 ARMS2P0C7Q2 107 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 SEC11BP0C7V7 166 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 IGHV3-30-5P0DP03 117 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 TPT1P13693 172 aaKnown RBP7.45□□□□□ -1.22
CCDC47-206ENST00000584112 ZNF674Q2M3X9 581 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 Q9HAA7 133 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 PHLDA3Q9Y5J5 127 aa7.45□□□□□ -1.22
CCDC47-206ENST00000584112 A0A087WWC5 75 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 A0A0D9SG52 128 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 KANTRA0A1W2PQU2 76 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GAGE12JA6NER3 117 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 HMSDA8MTL9 139 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 SMLR1H3BR10 107 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 LTAP01374 205 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 S100A9P06702 114 aaKnown RBP7.44□□□□□ -1.22
CCDC47-206ENST00000584112 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 CRIP1P50238 77 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 EIF5AP63241 154 aaKnown RBP7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GAGE1Q13065 139 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GAGE4Q13068 117 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GAGE5Q13069 117 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GAGE13Q4V321 117 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
CCDC47-206ENST00000584112 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
CCDC47-206ENST00000584112 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 PAGE4O60829 102 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 PFDN1O60925 122 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 GCSHP23434 173 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 ZFP82Q8N141 532 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 FAM213BQ8TBF2 198 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 SFT2D1Q8WV19 159 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 ZNF471Q9BX82 626 aaPredicted RBP7.43□□□□□ -1.22
CCDC47-206ENST00000584112 JPT2Q9H910 190 aa7.43□□□□□ -1.22
CCDC47-206ENST00000584112 TMSB15BA0A087X1C1 80 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 IGLV5-52A0A0A0MRZ9 124 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 LRCOL1A6NCL2 159 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 M0R381 172 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 BCL2L11O43521 198 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
CCDC47-206ENST00000584112 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 SAMD10Q9BYL1 202 aa7.42□□□□□ -1.22
CCDC47-206ENST00000584112 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
CCDC47-206ENST00000584112 Q8N814 137 aa7.41□□□□□ -1.22
CCDC47-206ENST00000584112 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
CCDC47-206ENST00000584112 A0A087WWL8 130 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 A0A1B0GV50 99 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.22
CCDC47-206ENST00000584112 CXCL1P09341 107 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 H2AFB1P0C5Y9 115 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
CCDC47-206ENST00000584112 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
CCDC47-206ENST00000584112 COX11Q9Y6N1 276 aa7.4□□□□□ -1.22
CCDC47-206ENST00000584112 DAZ4Q86SG3 579 aaKnown RBP7.39□□□□□ -1.23
CCDC47-206ENST00000584112 BAGE2Q86Y30 109 aa7.39□□□□□ -1.23
CCDC47-206ENST00000584112 RMI2Q96E14 147 aa7.39□□□□□ -1.23
CCDC47-206ENST00000584112 TMEM70Q9BUB7 260 aa7.39□□□□□ -1.23
CCDC47-206ENST00000584112 MLST8Q9BVC4 326 aa7.39□□□□□ -1.23
CCDC47-206ENST00000584112 DAZ3Q9NR90 486 aaKnown RBP7.39□□□□□ -1.23
CCDC47-206ENST00000584112 Q9UF83 564 aa7.39□□□□□ -1.23
CCDC47-206ENST00000584112 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 TEX46H3BTG2 121 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 RAB4BP61018 213 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 KCNIP4Q6PIL6 250 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 TMUB2Q71RG4 321 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 NIT1Q86X76 327 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 Q8N3U1 123 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 CHCHD7Q9BUK0 85 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
CCDC47-206ENST00000584112 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 A0A087WX48 190 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 RAB5CP51148 216 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 UBE2D3P61077 147 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 UBE2D2P62837 147 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 RPL19P84098 196 aaKnown RBP7.37□□□□□ -1.23
CCDC47-206ENST00000584112 ELOBQ15370 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms