RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 DKK2Q9UBU2 259 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 MYO9AB2RTY4 2548 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 ITPR2Q14571 2701 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 APCP25054 2843 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 J3QQQ9 107 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 NPYP01303 97 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
CDK5RAP3-231ENST00000584063 EGR2P11161 476 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 GFRA4Q9GZZ7 299 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 DPM3Q9P2X0 92 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 H3BRN7 92 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 CKS2P33552 79 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 CSN1S1P47710 185 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 MRPL51Q4U2R6 128 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.98
CDK5RAP3-231ENST00000584063 ABCA2Q9BZC7 2435 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PFN2P35080 140 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 LY6G5BQ8NDX9 201 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 AAMDCQ9H7C9 122 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IGHV4-61A0A0C4DH41 118 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 K7EMT4 169 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 COX8AP10176 69 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 ZC2HC1BQ5TFG8 222 aa8.89□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PRRC2AP48634 2157 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 COX6B1P14854 86 aa8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 LMO4P61968 165 aa8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 SORL1Q92673 2214 aa8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
CDK5RAP3-231ENST00000584063 MTORP42345 2549 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IGHV4-30-2A0A087WSY4 118 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 TRAV26-2A0A0B4J265 109 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 F8W1H4 67 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 BRD3OSQ6XYD6 125 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 TMEM14CQ9P0S9 112 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 AGRNO00468 2067 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 FABP2P12104 132 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 ECSCRQ19T08 205 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 ORMDL3Q8N138 153 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 LINC00527Q9UJ94 153 aa8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 GCN1Q92616 2671 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-231ENST00000584063 LINC01548A6NM66 108 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 H3BRM9 83 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 K7ERJ3 54 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 MRPS12O15235 138 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 MXRA5Q9NR99 2828 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 LGALS1P09382 135 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 DEFB1P60022 68 aa8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-231ENST00000584063 M0R1W7 72 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 HOXD3P31249 432 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 KIR3DS1Q14943 382 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PRR25Q96S07 402 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 SMAD5-AS1Q9Y6J3 95 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 PRSS1P07477 247 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 SAA4P35542 130 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 KRTAP10-9P60411 292 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 WFDC11Q8NEX6 87 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-231ENST00000584063 ODF3BA8MYP8 253 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 GTSCR1Q86UQ5 136 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 KLK15Q9H2R5 256 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 ZNF469Q96JG9 3925 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IGLV11-55A0A075B6I3 123 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 FOXI1Q12951 378 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 SPANXCQ9NY87 97 aa8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 FLNAP21333 2647 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-231ENST00000584063 IGKV3-7A0A075B6H7 116 aa8.84□□□□□ -1
CDK5RAP3-231ENST00000584063 APOC4P55056 127 aa8.84□□□□□ -1
CDK5RAP3-231ENST00000584063 DPH3Q96FX2 82 aa8.84□□□□□ -1
CDK5RAP3-231ENST00000584063 ITPR3Q14573 2671 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 TRAV40A0A0B4J280 105 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 G3V318 75 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 NDUFA3O95167 84 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 HBDP02042 147 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 TRGV3P03979 118 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 EEF1AKMT3Q96AZ1 226 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 OVOL1O14753 267 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 APOMO95445 188 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 SEC11AP67812 179 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 ZNF575Q86XF7 245 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 BRK1Q8WUW1 75 aa8.83□□□□□ -1
CDK5RAP3-231ENST00000584063 A0A0A0MQY5 61 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 FAM240AA0A1B0GVK7 77 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 AVPP01185 164 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 CTSGP08311 255 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 NPBQ8NG41 125 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms