RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 RAB19A4D1S5 217 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 RHODO00212 210 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 CENPWQ5EE01 88 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 LELP1Q5T871 98 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 MSRB1Q9NZV6 116 aa12.65□□□□□ -0.38
LIMS2-218ENST00000582671 K7EP13 123 aa12.64□□□□□ -0.39
LIMS2-218ENST00000582671 CXCL1P09341 107 aa12.64□□□□□ -0.39
LIMS2-218ENST00000582671 MEF2BQ02080 365 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-218ENST00000582671 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
LIMS2-218ENST00000582671 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
LIMS2-218ENST00000582671 A0A1B0GVG6 124 aa12.63□□□□□ -0.39
LIMS2-218ENST00000582671 BCL2P10415 239 aa12.63□□□□□ -0.39
LIMS2-218ENST00000582671 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
LIMS2-218ENST00000582671 SSBP4Q9BWG4 385 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-218ENST00000582671 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
LIMS2-218ENST00000582671 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
LIMS2-218ENST00000582671 SNAI2O43623 268 aa12.62□□□□□ -0.39
LIMS2-218ENST00000582671 IFNA1P01562 189 aa12.62□□□□□ -0.39
LIMS2-218ENST00000582671 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
LIMS2-218ENST00000582671 RYR1P21817 5038 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 IGHV3-30-3P0DP02 117 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 ALKAL2Q6UX46 152 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 VAX2Q9UIW0 290 aa12.61□□□□□ -0.39
LIMS2-218ENST00000582671 PDE6DO43924 150 aa12.6□□□□□ -0.39
LIMS2-218ENST00000582671 OR5AL1P0C617 328 aa12.6□□□□□ -0.39
LIMS2-218ENST00000582671 Q8N3U1 123 aa12.6□□□□□ -0.39
LIMS2-218ENST00000582671 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
LIMS2-218ENST00000582671 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
LIMS2-218ENST00000582671 DNAH5Q8TE73 4624 aa12.59□□□□□ -0.39
LIMS2-218ENST00000582671 C19orf71A6NCJ1 209 aa12.59□□□□□ -0.39
LIMS2-218ENST00000582671 GZMBP10144 247 aa12.59□□□□□ -0.39
LIMS2-218ENST00000582671 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
LIMS2-218ENST00000582671 GNG4P50150 75 aa12.59□□□□□ -0.39
LIMS2-218ENST00000582671 NKX2-5P52952 324 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-218ENST00000582671 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
LIMS2-218ENST00000582671 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
LIMS2-218ENST00000582671 SSTP61278 116 aa12.58□□□□□ -0.4
LIMS2-218ENST00000582671 A0A087WTM6 91 aa12.57□□□□□ -0.4
LIMS2-218ENST00000582671 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
LIMS2-218ENST00000582671 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
LIMS2-218ENST00000582671 KRTAP17-1Q9BYP8 105 aa12.57□□□□□ -0.4
LIMS2-218ENST00000582671 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
LIMS2-218ENST00000582671 TRBV10-1A0A0K0K1A3 114 aa12.56□□□□□ -0.4
LIMS2-218ENST00000582671 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
LIMS2-218ENST00000582671 RAB4BP61018 213 aa12.56□□□□□ -0.4
LIMS2-218ENST00000582671 OR2D3Q8NGH3 330 aa12.56□□□□□ -0.4
LIMS2-218ENST00000582671 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
LIMS2-218ENST00000582671 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
LIMS2-218ENST00000582671 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
LIMS2-218ENST00000582671 ZNF56Q15929 161 aa12.55□□□□□ -0.4
LIMS2-218ENST00000582671 LYPD6BQ8NI32 183 aa12.55□□□□□ -0.4
LIMS2-218ENST00000582671 DAZAP1Q96EP5 407 aaKnown RBP12.55□□□□□ -0.4
LIMS2-218ENST00000582671 Q9HAA7 133 aa12.55□□□□□ -0.4
LIMS2-218ENST00000582671 UBE2D3P61077 147 aa12.54□□□□□ -0.4
LIMS2-218ENST00000582671 UBE2D2P62837 147 aa12.54□□□□□ -0.4
LIMS2-218ENST00000582671 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
LIMS2-218ENST00000582671 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
LIMS2-218ENST00000582671 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
LIMS2-218ENST00000582671 TRBV7-3A0A075B6L6 115 aa12.53□□□□□ -0.4
LIMS2-218ENST00000582671 A0A087WWC5 75 aa12.53□□□□□ -0.4
LIMS2-218ENST00000582671 CDK2AP2O75956 126 aa12.53□□□□□ -0.4
LIMS2-218ENST00000582671 RPS20P60866 119 aaKnown RBP12.53□□□□□ -0.4
LIMS2-218ENST00000582671 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
LIMS2-218ENST00000582671 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
LIMS2-218ENST00000582671 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
LIMS2-218ENST00000582671 TPPP3Q9BW30 176 aa12.53□□□□□ -0.4
LIMS2-218ENST00000582671 K7EN84 100 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 EREGO14944 169 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 P01737 135 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 DAZ4Q86SG3 579 aaKnown RBP12.52□□□□□ -0.41
LIMS2-218ENST00000582671 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 NUDT11Q96G61 164 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 DAZ3Q9NR90 486 aaKnown RBP12.52□□□□□ -0.41
LIMS2-218ENST00000582671 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
LIMS2-218ENST00000582671 HSPG2P98160 4391 aa12.52□□□□□ -0.41
LIMS2-218ENST00000582671 LRCOL1A6NCL2 159 aa12.51□□□□□ -0.41
LIMS2-218ENST00000582671 F5H697 171 aa12.51□□□□□ -0.41
LIMS2-218ENST00000582671 NIT1Q86X76 327 aa12.51□□□□□ -0.41
LIMS2-218ENST00000582671 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
LIMS2-218ENST00000582671 PCLOQ9Y6V0 5065 aa12.5□□□□□ -0.41
LIMS2-218ENST00000582671 LAGE3Q14657 143 aa12.5□□□□□ -0.41
LIMS2-218ENST00000582671 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
LIMS2-218ENST00000582671 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
LIMS2-218ENST00000582671 PSCAO43653 123 aa12.49□□□□□ -0.41
LIMS2-218ENST00000582671 CACNG7P62955 275 aa12.49□□□□□ -0.41
LIMS2-218ENST00000582671 KRTAP4-5Q9BYR2 181 aa12.49□□□□□ -0.41
LIMS2-218ENST00000582671 RNASE7Q9H1E1 156 aaKnown RBP12.49□□□□□ -0.41
LIMS2-218ENST00000582671 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
LIMS2-218ENST00000582671 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
LIMS2-218ENST00000582671 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
LIMS2-218ENST00000582671 XKRY2A2RUG3 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms