RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 TRAV6A0A075B6T7 132 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 FBLL1A6NHQ2 334 aaKnown RBP4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SIX6O95475 246 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 S100A11P31949 105 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 H2BFSP57053 126 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PRR3P79522 188 aaKnown RBP4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 IFITM3Q01628 133 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 RGS21Q2M5E4 152 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 ENHOQ6UWT2 76 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 NIT1Q86X76 327 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 OR5C1Q8NGR4 320 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SGK494Q96LW2 274 aa4.76□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GGTLC3B5MD39 225 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 L7N2F9 121 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PHOX2AO14813 284 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 LYRM1O43325 122 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 UBE2L3P68036 154 aaKnown RBP4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 RHOHQ15669 191 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GOLT1AQ6ZVE7 132 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 S100A7AQ86SG5 101 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 NHLRC2Q8NBF2 726 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 AAMDCQ9H7C9 122 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GPN1Q9HCN4 374 aaPredicted RBP4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 NAGKQ9UJ70 344 aa4.75□□□□□ -1.65
CDK5RAP3-221ENST00000581662 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GATCO43716 136 aaKnown RBP4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 INPP1P49441 399 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 CRIP1P50238 77 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PPT1P50897 306 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 BCAP31P51572 246 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 S100A10P60903 97 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 RAB2AP61019 212 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 OR10J3Q5JRS4 329 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 FAM159AQ6UWV7 190 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 C12orf45Q8N5I9 185 aaPredicted RBP4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 ATP6V0E2Q8NHE4 81 aa4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PCNPQ8WW12 178 aaKnown RBP4.74□□□□□ -1.65
CDK5RAP3-221ENST00000581662 C5orf51A6NDU8 294 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GAGE12JA6NER3 117 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 OR7C2O60412 319 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PRSS1P07477 247 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 VAMP2P63027 116 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GAGE1Q13065 139 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GAGE4Q13068 117 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 GAGE5Q13069 117 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 ATP6V1FQ16864 119 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 ZNF876PQ49A33 203 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SH2D6Q7Z4S9 175 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 OTORQ9NRC9 128 aa4.73□□□□□ -1.65
CDK5RAP3-221ENST00000581662 TRAV21A0A0B4J279 112 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 A0A1B0GVG6 124 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PGPA6NDG6 321 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 HMGB3O15347 200 aaKnown RBP4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 PFN1P07737 140 aaKnown RBP4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SRSF9Q13242 221 aaKnown RBP eCLIP4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 COTL1Q14019 142 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SPANXN2Q5MJ10 180 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 TRIQKQ629K1 86 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 SDIM1Q6ZPB5 146 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 NTM-AS1Q6ZSK4 140 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 HSPB11Q9Y547 144 aa4.72□□□□□ -1.65
CDK5RAP3-221ENST00000581662 TRAV8-3A0A0A6YYJ7 113 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 TRAV8-6A0A0B4J262 113 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 SNAPINO95295 136 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 TCRAP04437 139 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 MGST1P10620 155 aaKnown RBP4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 RAB4BP61018 213 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 HBG1P69891 147 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 HBG2P69892 147 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 RAB31Q13636 194 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 ZNF726P1Q15940 193 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 MPV17L2Q567V2 206 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 DNLZQ5SXM8 178 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 ZFP2Q6ZN57 461 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 CYB561D1Q8N8Q1 229 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 HYLS1Q96M11 299 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 ATP5SQ99766 215 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 TREM1Q9NP99 234 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 KLK12Q9UKR0 248 aa4.71□□□□□ -1.66
CDK5RAP3-221ENST00000581662 TRAV26-2A0A0B4J265 109 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 USP17L23D6RBM5 183 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 H7C1H1 209 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 GCGP01275 180 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 CHTF8P0CG12 524 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 STAG3L2P0CL84 134 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 STAG3L3P0CL85 134 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 ARL14EPLP0DKL9 152 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 UBE2D3P61077 147 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 UBE2D2P62837 147 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 CNPY1Q3B7I2 92 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 KHDC3LQ587J8 217 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 PIK3CD-AS1Q5SR53 167 aa4.7□□□□□ -1.66
CDK5RAP3-221ENST00000581662 PRR27Q6MZM9 219 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms