RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 RPL19P84098 196 aaKnown RBP9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 GAGE1Q13065 139 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 GAGE4Q13068 117 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 GAGE5Q13069 117 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
SUPT4H1-205ENST00000581166 A0A087WWL8 130 aa9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 PDE6DO43924 150 aa9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 C9orf62Q8N4C0 152 aa9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 Q9UF83 564 aa9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
SUPT4H1-205ENST00000581166 SNAI2O43623 268 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 CENPWQ5EE01 88 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 EREGO14944 169 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 OR5AL1P0C617 328 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 BCL2P10415 239 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 TAGLN2P37802 199 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
SUPT4H1-205ENST00000581166 RAB19A4D1S5 217 aa9.47□□□□□ -0.89
SUPT4H1-205ENST00000581166 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
SUPT4H1-205ENST00000581166 IGLV2-8P01709 118 aa9.47□□□□□ -0.89
SUPT4H1-205ENST00000581166 MED9Q9NWA0 146 aa9.47□□□□□ -0.89
SUPT4H1-205ENST00000581166 VAX2Q9UIW0 290 aa9.47□□□□□ -0.89
SUPT4H1-205ENST00000581166 A0A087WWC5 75 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 GNG4P50150 75 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 SPANXN1Q5VSR9 72 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 DAZAP1Q96EP5 407 aaKnown RBP9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SUPT4H1-205ENST00000581166 A0A087WTM6 91 aa9.45□□□□□ -0.9
SUPT4H1-205ENST00000581166 RAB4BP61018 213 aa9.45□□□□□ -0.9
SUPT4H1-205ENST00000581166 RYR1P21817 5038 aa9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 ALKAL2Q6UX46 152 aa9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 HSPG2P98160 4391 aa9.44□□□□□ -0.9
SUPT4H1-205ENST00000581166 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 TRBV20OR9-2A0A075B6H5 130 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 MUC21A0A0G2JKD1 596 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 MUC21A0A140T8X8 626 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 BLOC1S1P78537 153 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 LAGE3Q14657 143 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 OR2D3Q8NGH3 330 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
SUPT4H1-205ENST00000581166 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
SUPT4H1-205ENST00000581166 UBE2D3P61077 147 aa9.42□□□□□ -0.9
SUPT4H1-205ENST00000581166 UBE2D2P62837 147 aa9.42□□□□□ -0.9
SUPT4H1-205ENST00000581166 ZNF56Q15929 161 aa9.42□□□□□ -0.9
SUPT4H1-205ENST00000581166 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
SUPT4H1-205ENST00000581166 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 PSCAO43653 123 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 P01737 135 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 GZMBP10144 247 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 SSTP61278 116 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 Q8N3U1 123 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 Q9HAA7 133 aa9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
SUPT4H1-205ENST00000581166 SMIM17P0DL12 118 aa9.4□□□□□ -0.9
SUPT4H1-205ENST00000581166 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
SUPT4H1-205ENST00000581166 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
SUPT4H1-205ENST00000581166 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
SUPT4H1-205ENST00000581166 A0A1B0GVG6 124 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 LRCOL1A6NCL2 159 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 RBFOX3A6NFN3 312 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 F2Z2F3 143 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 F5H697 171 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 CACNG7P62955 275 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 NKX2-5P52952 324 aaPredicted RBP9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 NIT1Q86X76 327 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 TM2D2Q9BX73 214 aa9.39□□□□□ -0.91
SUPT4H1-205ENST00000581166 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms