RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CKS2P33552 79 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 TMEM97Q5BJF2 176 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 ZNF493Q6ZR52 646 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 MRPL53Q96EL3 112 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 C11orf21Q9P2W6 132 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 MRPL51Q4U2R6 128 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 OR10J6PQ8NGY7 276 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 ZNF747Q9BV97 191 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 GAGE10A6NGK3 116 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 SEC11AP67812 179 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 UFSP1Q6NVU6 142 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
CDK5RAP3-217ENST00000580287 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 NPYP01303 97 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 ZNF688P0C7X2 276 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 FGF6P10767 208 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 EVI2AP22794 236 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 FHL3Q13643 280 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
CDK5RAP3-217ENST00000580287 PRR9Q5T870 116 aa9.47□□□□□ -0.89
CDK5RAP3-217ENST00000580287 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
CDK5RAP3-217ENST00000580287 C18orf15Q96N68 181 aa9.47□□□□□ -0.89
CDK5RAP3-217ENST00000580287 PRIMA1Q86XR5 153 aa9.46□□□□□ -0.89
CDK5RAP3-217ENST00000580287 OR10AG1Q8NH19 301 aa9.46□□□□□ -0.89
CDK5RAP3-217ENST00000580287 C9orf118A6NHY6 69 aa9.46□□□□□ -0.9
CDK5RAP3-217ENST00000580287 KRTAP24-1Q3LI83 254 aa9.46□□□□□ -0.9
CDK5RAP3-217ENST00000580287 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-217ENST00000580287 PEMTQ9UBM1 199 aa9.46□□□□□ -0.9
CDK5RAP3-217ENST00000580287 H3BVH4 76 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 OVOL1O14753 267 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 GTF2H5Q6ZYL4 71 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 H3BRM9 83 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 RNASE4P34096 147 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
CDK5RAP3-217ENST00000580287 H3BUT2 72 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 K7EP34 96 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 S100A4P26447 101 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 CACNG7P62955 275 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 AGRNO00468 2067 aa9.44□□□□□ -0.9
CDK5RAP3-217ENST00000580287 A6NDN8 102 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 G3V4G9 280 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 K7EQG2 157 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 U3KQK5 164 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
CDK5RAP3-217ENST00000580287 NDUFA11Q86Y39 141 aa9.42□□□□□ -0.9
CDK5RAP3-217ENST00000580287 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
CDK5RAP3-217ENST00000580287 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
CDK5RAP3-217ENST00000580287 M0R381 172 aa9.42□□□□□ -0.9
CDK5RAP3-217ENST00000580287 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
CDK5RAP3-217ENST00000580287 HSD52Q0P140 79 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 RAB37Q96AX2 223 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
CDK5RAP3-217ENST00000580287 SIVA1O15304 175 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 DEFB131AP59861 70 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 HERV-K104P63124 156 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 LGALS9BQ3B8N2 356 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 LGALS9CQ6DKI2 356 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 APRG1Q8IVJ8 170 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
CDK5RAP3-217ENST00000580287 ASIPP42127 132 aa9.39□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-217ENST00000580287 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
CDK5RAP3-217ENST00000580287 GNRH2O43555 120 aa9.39□□□□□ -0.91
CDK5RAP3-217ENST00000580287 HBDP02042 147 aa9.39□□□□□ -0.91
CDK5RAP3-217ENST00000580287 A0A1W2PPM0 123 aa9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 LEPP41159 167 aa9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
CDK5RAP3-217ENST00000580287 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms