RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SCRT2Q9NQ03 307 aa7.44□□□□□ -1.22
NDEL1-208ENST00000580237 BIN3Q9NQY0 253 aa7.44□□□□□ -1.22
NDEL1-208ENST00000580237 IGHV3-38A0A0C4DH36 116 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 K7EP13 123 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 P01737 135 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 CRYGDP07320 174 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 DNAH10OSP0CZ25 163 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
NDEL1-208ENST00000580237 SSTP61278 116 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 Q6ZSN1 163 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 NFE4Q86UQ8 179 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 C14orf178Q8N769 122 aaPredicted RBP7.43□□□□□ -1.22
NDEL1-208ENST00000580237 OR2D3Q8NGH3 330 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 AP1S3Q96PC3 154 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 GTSF1LQ9H1H1 148 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 BOLA1Q9Y3E2 137 aa7.43□□□□□ -1.22
NDEL1-208ENST00000580237 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 SMIM17P0DL12 118 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 CEBPGP53567 150 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 LELP1Q5T871 98 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 DNAH10Q8IVF4 4471 aa7.42□□□□□ -1.22
NDEL1-208ENST00000580237 F5H697 171 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 EREGO14944 169 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 SNAI2O43623 268 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 GZMBP10144 247 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 RPL36AP83881 106 aaKnown RBP7.41□□□□□ -1.22
NDEL1-208ENST00000580237 TOR2AQ5JU69 321 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 UFSP1Q6NVU6 142 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 FER1L6-AS1Q8NA97 138 aa7.41□□□□□ -1.22
NDEL1-208ENST00000580237 RPL36ALQ969Q0 106 aaKnown RBP7.41□□□□□ -1.22
NDEL1-208ENST00000580237 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 A0A087WWC5 75 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 RBFOX3A6NFN3 312 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 PSCAO43653 123 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 LINC00694P0DN24 101 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.4□□□□□ -1.22
NDEL1-208ENST00000580237 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.22
NDEL1-208ENST00000580237 URGCP-MRPS24S4R325 110 aa7.4□□□□□ -1.22
NDEL1-208ENST00000580237 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 TMEM250H0YL14 139 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 MGPP08493 103 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 RAB4BP61018 213 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 CACNG7P62955 275 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 Q9HAA7 133 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 TNFRSF18Q9Y5U5 241 aa7.39□□□□□ -1.23
NDEL1-208ENST00000580237 KCNIP4Q6PIL6 250 aa7.38□□□□□ -1.23
NDEL1-208ENST00000580237 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
NDEL1-208ENST00000580237 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
NDEL1-208ENST00000580237 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
NDEL1-208ENST00000580237 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
NDEL1-208ENST00000580237 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
NDEL1-208ENST00000580237 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
NDEL1-208ENST00000580237 Q9UF83 564 aa7.37□□□□□ -1.23
NDEL1-208ENST00000580237 HECTD4Q9Y4D8 3996 aa7.37□□□□□ -1.23
NDEL1-208ENST00000580237 F2Z2F3 143 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 H7C1H1 209 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 UBE2D3P61077 147 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 UBE2D2P62837 147 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 LYPD6BQ8NI32 183 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 OCC1Q8TAD7 63 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 SMIM7Q9BQ49 75 aa7.36□□□□□ -1.23
NDEL1-208ENST00000580237 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
NDEL1-208ENST00000580237 A0A087WX48 190 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 IBA57-AS1B1ANH7 110 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 K7EN84 100 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 CTRLP40313 264 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 LAGE3Q14657 143 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 Q8N3U1 123 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 OR10G8Q8NGN5 311 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
NDEL1-208ENST00000580237 ZNF727A8MUV8 499 aa7.34□□□□□ -1.23
NDEL1-208ENST00000580237 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
NDEL1-208ENST00000580237 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
NDEL1-208ENST00000580237 TWIST1Q15672 202 aa7.34□□□□□ -1.23
NDEL1-208ENST00000580237 BORCS7Q96B45 105 aa7.34□□□□□ -1.23
NDEL1-208ENST00000580237 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
NDEL1-208ENST00000580237 A0A087WTM6 91 aa7.33□□□□□ -1.24
NDEL1-208ENST00000580237 TRAV8-3A0A0A6YYJ7 113 aa7.33□□□□□ -1.24
NDEL1-208ENST00000580237 NTF3P20783 257 aa7.33□□□□□ -1.24
NDEL1-208ENST00000580237 SUMO4Q6EEV6 95 aa7.33□□□□□ -1.24
NDEL1-208ENST00000580237 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms