RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SPANXN1Q5VSR9 72 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 OR2D3Q8NGH3 330 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 ATP6V0E2Q8NHE4 81 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 LY96Q9Y6Y9 160 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 K7EP13 123 aa16.04■□□□□ 0.16
SNF8-217ENST00000576353 P01737 135 aa16.04■□□□□ 0.16
SNF8-217ENST00000576353 XKRY2A2RUG3 117 aa16.03■□□□□ 0.16
SNF8-217ENST00000576353 WFDC10BQ8IUB3 73 aa16.03■□□□□ 0.16
SNF8-217ENST00000576353 GTSF1LQ9H1H1 148 aa16.03■□□□□ 0.16
SNF8-217ENST00000576353 TRAV8-6A0A0B4J262 113 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 GAGE12JA6NER3 117 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 EVI2AP22794 236 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 GAGE1Q13065 139 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 GAGE4Q13068 117 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 GAGE5Q13069 117 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 GAGE13Q4V321 117 aa16.02■□□□□ 0.16
SNF8-217ENST00000576353 C14orf178Q8N769 122 aaPredicted RBP16.02■□□□□ 0.16
SNF8-217ENST00000576353 EIF5A2Q9GZV4 153 aaKnown RBP16.02■□□□□ 0.16
SNF8-217ENST00000576353 DNAH10OSP0CZ25 163 aa16.01■□□□□ 0.15
SNF8-217ENST00000576353 MUC21A0A0G2JKD1 596 aa16■□□□□ 0.15
SNF8-217ENST00000576353 MUC21A0A140T8X8 626 aa16■□□□□ 0.15
SNF8-217ENST00000576353 TOR2AQ5JU69 321 aa16■□□□□ 0.15
SNF8-217ENST00000576353 LELP1Q5T871 98 aa16■□□□□ 0.15
SNF8-217ENST00000576353 FER1L6-AS1Q8NA97 138 aa16■□□□□ 0.15
SNF8-217ENST00000576353 OCC1Q8TAD7 63 aa16■□□□□ 0.15
SNF8-217ENST00000576353 NDUFS6O75380 124 aaKnown RBP15.99■□□□□ 0.15
SNF8-217ENST00000576353 IGLC6P0CF74 106 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 LINC00694P0DN24 101 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 GZMBP10144 247 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 LINC00315P59091 139 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 TNP2Q05952 138 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 OR10J3Q5JRS4 329 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 FAM210AQ96ND0 272 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 TPPP3Q9BW30 176 aa15.99■□□□□ 0.15
SNF8-217ENST00000576353 IGHV3-38A0A0C4DH36 116 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 TRBV10-1A0A0K0K1A3 114 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 RAB4BP61018 213 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 NUDT10Q8NFP7 164 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 NUDT11Q96G61 164 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 Q9UF83 564 aa15.98■□□□□ 0.15
SNF8-217ENST00000576353 F2Z2F3 143 aa15.97■□□□□ 0.15
SNF8-217ENST00000576353 CEBPGP53567 150 aa15.97■□□□□ 0.15
SNF8-217ENST00000576353 SSTP61278 116 aa15.97■□□□□ 0.15
SNF8-217ENST00000576353 C10orf126Q8N4M7 172 aa15.97■□□□□ 0.15
SNF8-217ENST00000576353 DNAH2Q9P225 4427 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 SMIM17P0DL12 118 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 CACNG7P62955 275 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 TEX261Q6UWH6 196 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 NFE4Q86UQ8 179 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 AP1S3Q96PC3 154 aa15.96■□□□□ 0.15
SNF8-217ENST00000576353 A0A087WWC5 75 aa15.95■□□□□ 0.14
SNF8-217ENST00000576353 K7EN84 100 aa15.95■□□□□ 0.14
SNF8-217ENST00000576353 RPL36AP83881 106 aaKnown RBP15.95■□□□□ 0.14
SNF8-217ENST00000576353 ZNF56Q15929 161 aa15.95■□□□□ 0.14
SNF8-217ENST00000576353 RPL36ALQ969Q0 106 aaKnown RBP15.95■□□□□ 0.14
SNF8-217ENST00000576353 LINC01556Q5JQF7 62 aa15.94■□□□□ 0.14
SNF8-217ENST00000576353 RNASE7Q9H1E1 156 aaKnown RBP15.94■□□□□ 0.14
SNF8-217ENST00000576353 RPP21Q9H633 154 aaKnown RBP15.94■□□□□ 0.14
SNF8-217ENST00000576353 HECTD4Q9Y4D8 3996 aa15.94■□□□□ 0.14
SNF8-217ENST00000576353 F5H697 171 aa15.93■□□□□ 0.14
SNF8-217ENST00000576353 MSRB1Q9NZV6 116 aa15.93■□□□□ 0.14
SNF8-217ENST00000576353 TRBV7-3A0A075B6L6 115 aa15.92■□□□□ 0.14
SNF8-217ENST00000576353 LYZL1Q6UWQ5 148 aa15.92■□□□□ 0.14
SNF8-217ENST00000576353 SMIM7Q9BQ49 75 aa15.92■□□□□ 0.14
SNF8-217ENST00000576353 DNAH17Q9UFH2 4485 aa15.91■□□□□ 0.14
SNF8-217ENST00000576353 WDR73Q6P4I2 378 aa15.91■□□□□ 0.14
SNF8-217ENST00000576353 Q6ZRN7 208 aaPredicted RBP15.91■□□□□ 0.14
SNF8-217ENST00000576353 OR10G8Q8NGN5 311 aa15.91■□□□□ 0.14
SNF8-217ENST00000576353 KIF25-AS1Q9Y6Z4 181 aa15.91■□□□□ 0.14
SNF8-217ENST00000576353 SRP19P09132 144 aaKnown RBP15.9■□□□□ 0.14
SNF8-217ENST00000576353 FAM231DQ6ZW35 169 aa15.9■□□□□ 0.14
SNF8-217ENST00000576353 TNFRSF18Q9Y5U5 241 aa15.9■□□□□ 0.14
SNF8-217ENST00000576353 FAT2Q9NYQ8 4349 aa15.9■□□□□ 0.14
SNF8-217ENST00000576353 ZNF727A8MUV8 499 aa15.89■□□□□ 0.13
SNF8-217ENST00000576353 UBE2D3P61077 147 aa15.89■□□□□ 0.13
SNF8-217ENST00000576353 UBE2D2P62837 147 aa15.89■□□□□ 0.13
SNF8-217ENST00000576353 GATCO43716 136 aaKnown RBP15.88■□□□□ 0.13
SNF8-217ENST00000576353 TRGC1P0CF51 173 aa15.88■□□□□ 0.13
SNF8-217ENST00000576353 NTF3P20783 257 aa15.88■□□□□ 0.13
SNF8-217ENST00000576353 CTRLP40313 264 aa15.88■□□□□ 0.13
SNF8-217ENST00000576353 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.88■□□□□ 0.13
SNF8-217ENST00000576353 NEXN-AS1Q8NBZ9 246 aa15.88■□□□□ 0.13
SNF8-217ENST00000576353 IGHV3-30P01768 117 aa15.87■□□□□ 0.13
SNF8-217ENST00000576353 IGHV3-33P01772 117 aa15.87■□□□□ 0.13
SNF8-217ENST00000576353 IGHV3-30-3P0DP02 117 aa15.87■□□□□ 0.13
SNF8-217ENST00000576353 IGHV3-30-5P0DP03 117 aa15.87■□□□□ 0.13
SNF8-217ENST00000576353 ERVFC1-1P60608 527 aa15.87■□□□□ 0.13
SNF8-217ENST00000576353 A8MWL6 223 aa15.86■□□□□ 0.13
SNF8-217ENST00000576353 IBA57-AS1B1ANH7 110 aa15.86■□□□□ 0.13
SNF8-217ENST00000576353 MGPP08493 103 aa15.86■□□□□ 0.13
SNF8-217ENST00000576353 LINC01551Q86U37 167 aa15.86■□□□□ 0.13
SNF8-217ENST00000576353 CNFNQ9BYD5 112 aa15.86■□□□□ 0.13
SNF8-217ENST00000576353 PEA15Q15121 130 aa15.85■□□□□ 0.13
SNF8-217ENST00000576353 H7C1H1 209 aa15.84■□□□□ 0.13
SNF8-217ENST00000576353 TWIST1Q15672 202 aa15.84■□□□□ 0.13
SNF8-217ENST00000576353 FAM74A3Q4VXF1 159 aa15.84■□□□□ 0.13
SNF8-217ENST00000576353 CT83Q5H943 113 aa15.84■□□□□ 0.13
SNF8-217ENST00000576353 DPH3P1Q9H4G8 78 aa15.84■□□□□ 0.13
SNF8-217ENST00000576353 EREGO14944 169 aa15.83■□□□□ 0.12
SNF8-217ENST00000576353 GTSF1Q8WW33 167 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms