RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
SCARF1-208ENST00000574545 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 RHODO00212 210 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 CXCL1P09341 107 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 RPL19P84098 196 aaKnown RBP13.23□□□□□ -0.29
SCARF1-208ENST00000574545 GAGE1Q13065 139 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 GAGE4Q13068 117 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 GAGE5Q13069 117 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 PGPEP1Q9NXJ5 209 aa13.23□□□□□ -0.29
SCARF1-208ENST00000574545 SULT1A2P50226 295 aa13.22□□□□□ -0.29
SCARF1-208ENST00000574545 C11orf52Q96A22 123 aa13.22□□□□□ -0.29
SCARF1-208ENST00000574545 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
SCARF1-208ENST00000574545 M0R381 172 aa13.21□□□□□ -0.29
SCARF1-208ENST00000574545 C1QBP02746 253 aa13.21□□□□□ -0.29
SCARF1-208ENST00000574545 RPL35P42766 123 aaKnown RBP13.21□□□□□ -0.29
SCARF1-208ENST00000574545 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
SCARF1-208ENST00000574545 SSBP4Q9BWG4 385 aaPredicted RBP13.21□□□□□ -0.29
SCARF1-208ENST00000574545 A0A087WWL8 130 aa13.2□□□□□ -0.3
SCARF1-208ENST00000574545 FUSP35637 526 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCARF1-208ENST00000574545 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
SCARF1-208ENST00000574545 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
SCARF1-208ENST00000574545 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
SCARF1-208ENST00000574545 EREGO14944 169 aa13.19□□□□□ -0.3
SCARF1-208ENST00000574545 SNAI2O43623 268 aa13.19□□□□□ -0.3
SCARF1-208ENST00000574545 IGLV2-8P01709 118 aa13.19□□□□□ -0.3
SCARF1-208ENST00000574545 FAM74A4Q5TZK3 123 aa13.19□□□□□ -0.3
SCARF1-208ENST00000574545 LRCOL1A6NCL2 159 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 IGHV3-33P01772 117 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 SLC51BQ86UW2 128 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 Q8N3U1 123 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 OR10AG1Q8NH19 301 aa13.18□□□□□ -0.3
SCARF1-208ENST00000574545 OR5AL1P0C617 328 aa13.17□□□□□ -0.3
SCARF1-208ENST00000574545 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
SCARF1-208ENST00000574545 A0A087WWC5 75 aa13.15□□□□□ -0.3
SCARF1-208ENST00000574545 TRBV10-1A0A0K0K1A3 114 aa13.15□□□□□ -0.3
SCARF1-208ENST00000574545 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
SCARF1-208ENST00000574545 LAGE3Q14657 143 aa13.15□□□□□ -0.3
SCARF1-208ENST00000574545 MAPKAPK5-AS1Q8N8E1 139 aa13.15□□□□□ -0.3
SCARF1-208ENST00000574545 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
SCARF1-208ENST00000574545 OR10G8Q8NGN5 311 aa13.14□□□□□ -0.31
SCARF1-208ENST00000574545 RAB19A4D1S5 217 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 UBE2D3P61077 147 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 UBE2D2P62837 147 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
SCARF1-208ENST00000574545 DAZ4Q86SG3 579 aaKnown RBP13.13□□□□□ -0.31
SCARF1-208ENST00000574545 Q8N1X5 172 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 Q9HAA7 133 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 DAZ3Q9NR90 486 aaKnown RBP13.13□□□□□ -0.31
SCARF1-208ENST00000574545 KIF25-AS1Q9Y6Z4 181 aa13.13□□□□□ -0.31
SCARF1-208ENST00000574545 MUC21A0A0G2JKD1 596 aa13.12□□□□□ -0.31
SCARF1-208ENST00000574545 MUC21A0A140T8X8 626 aa13.12□□□□□ -0.31
SCARF1-208ENST00000574545 KRTAP10-1P60331 282 aa13.12□□□□□ -0.31
SCARF1-208ENST00000574545 RAB4BP61018 213 aa13.12□□□□□ -0.31
SCARF1-208ENST00000574545 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
SCARF1-208ENST00000574545 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 PSCAO43653 123 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 PDE6DO43924 150 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 BCL2P10415 239 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 RPL36AP83881 106 aaKnown RBP13.11□□□□□ -0.31
SCARF1-208ENST00000574545 NIT1Q86X76 327 aa13.11□□□□□ -0.31
SCARF1-208ENST00000574545 RPL36ALQ969Q0 106 aaKnown RBP13.11□□□□□ -0.31
SCARF1-208ENST00000574545 XGP55808 180 aa13.1□□□□□ -0.31
SCARF1-208ENST00000574545 SPANXN1Q5VSR9 72 aa13.1□□□□□ -0.31
SCARF1-208ENST00000574545 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
SCARF1-208ENST00000574545 NEXN-AS1Q8NBZ9 246 aa13.1□□□□□ -0.31
SCARF1-208ENST00000574545 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
SCARF1-208ENST00000574545 IFNA1P01562 189 aa13.09□□□□□ -0.31
SCARF1-208ENST00000574545 GZMBP10144 247 aa13.09□□□□□ -0.31
SCARF1-208ENST00000574545 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
SCARF1-208ENST00000574545 VAX2Q9UIW0 290 aa13.09□□□□□ -0.31
SCARF1-208ENST00000574545 GNG4P50150 75 aa13.08□□□□□ -0.32
SCARF1-208ENST00000574545 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 RBFOX3A6NFN3 312 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 ZNF56Q15929 161 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 Q8N814 137 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 OR2D3Q8NGH3 330 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 TM2D2Q9BX73 214 aa13.07□□□□□ -0.32
SCARF1-208ENST00000574545 hCG_2014768A0A024R1R8 64 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 GCSHP23434 173 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 TAGLN2P37802 199 aaKnown RBP13.06□□□□□ -0.32
SCARF1-208ENST00000574545 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
SCARF1-208ENST00000574545 SSTP61278 116 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 WFDC2Q14508 124 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-208ENST00000574545 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
SCARF1-208ENST00000574545 CHCHD7Q9BUK0 85 aa13.06□□□□□ -0.32
SCARF1-208ENST00000574545 FER1L6-AS1Q8NA97 138 aa13.05□□□□□ -0.32
SCARF1-208ENST00000574545 DNAJC30Q96LL9 226 aa13.05□□□□□ -0.32
SCARF1-208ENST00000574545 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
SCARF1-208ENST00000574545 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms