RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 SPCS3P61009 180 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 HERVK_113P61574 105 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 CD164Q04900 197 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 RAB31Q13636 194 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 TRAM1Q15629 374 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 TMEM91Q6ZNR0 172 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 DAZ4Q86SG3 579 aaKnown RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 Q8TAT8 98 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 PARD6GQ9BYG4 376 aaPredicted RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
TRIM25-208ENST00000574234 CBY1Q9Y3M2 126 aa3.11□□□□□ -1.91
TRIM25-208ENST00000574234 TRAV8-4A0A0B4J246 113 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 FAM168BA1KXE4 195 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 GABARAPH6UMI1 98 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 GABARAPO95166 117 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 P01737 135 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 PET100P0DJ07 73 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 CXCL2P19875 107 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 AKR1C2P52895 323 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 TMBIM6P55061 237 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 NMSQ5H8A3 153 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 LPCAT3Q6P1A2 487 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF555Q8NEP9 628 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 OR10P1Q8NGE3 313 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 OR5H2Q8NGV7 314 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 S100ZQ8WXG8 99 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 SLC35E1Q96K37 410 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 TRGV9Q99603 122 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF2Q9BSG1 426 aaPredicted RBP3.1□□□□□ -1.91
TRIM25-208ENST00000574234 GFRA4Q9GZZ7 299 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 FXYD6Q9H0Q3 95 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 GTSF1LQ9H1H1 148 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 FKBP14Q9NWM8 211 aa3.1□□□□□ -1.91
TRIM25-208ENST00000574234 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 TRAV4A0A0B4J268 109 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 C7orf71A4D174 169 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 KLLNB2CW77 178 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 PDCD5O14737 125 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 BCL2L11O43521 198 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 OR10J4P0C629 311 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 CTRLP40313 264 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 CCR6P51684 374 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 AQP4P55087 323 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 DYNC2LI1Q8TCX1 351 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 RAB2BQ8WUD1 216 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 MND1Q9BWT6 205 aa3.09□□□□□ -1.91
TRIM25-208ENST00000574234 ZNF331Q9NQX6 463 aaPredicted RBP3.09□□□□□ -1.91
TRIM25-208ENST00000574234 IGHV3-64A0A075B6Q5 118 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TRAV1-2A0A0B4J238 106 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 A0A1B0GVG6 124 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 CCDC160A6NGH7 325 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 CRYM-AS1A6NIL9 109 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 H3BRN7 92 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 HLA-DMAP28067 261 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TAS2R46P59540 309 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 GABARAPL2P60520 117 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 Q0VG73 95 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 ELOBQ15370 118 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 RHOHQ15669 191 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 GUK1Q16774 197 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TMEM183BQ1AE95 376 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 RGS21Q2M5E4 152 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 LCN15Q6UWW0 184 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 NIT1Q86X76 327 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TMEM183AQ8IXX5 376 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 DNAJC30Q96LL9 226 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 SLC50A1Q9BRV3 221 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 CHCHD7Q9BUK0 85 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 C9orf16Q9BUW7 83 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TMEM147Q9BVK8 224 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TMEM222Q9H0R3 208 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 CACFD1Q9UGQ2 172 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 TP53TG3Q9ULZ0 132 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 PRELID1Q9Y255 219 aa3.08□□□□□ -1.92
TRIM25-208ENST00000574234 LSM2Q9Y333 95 aaKnown RBP3.08□□□□□ -1.92
TRIM25-208ENST00000574234 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
TRIM25-208ENST00000574234 A0A087WWC5 75 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 TRBV6-4A0A1B0GX49 114 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 NMBP08949 121 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 FABP5Q01469 135 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 BTN1A1Q13410 526 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 SLC51BQ86UW2 128 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 LGI3Q8N145 548 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 PYDC1Q8WXC3 89 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 UBE2WQ96B02 151 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 PRADC1Q9BSG0 188 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 SAMD10Q9BYL1 202 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.07□□□□□ -1.92
TRIM25-208ENST00000574234 KLK12Q9UKR0 248 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 SSR3Q9UNL2 185 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 U3KQ87 197 aa3.07□□□□□ -1.92
TRIM25-208ENST00000574234 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
TRIM25-208ENST00000574234 IGLV1-50A0A075B6I6 118 aa3.06□□□□□ -1.92
TRIM25-208ENST00000574234 ORM2P19652 201 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 308.2 ms