RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SLC25A29Q8N8R3 303 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 AP1S3Q96PC3 154 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 JPT2Q9H910 190 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 A0A087WWL8 130 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 C9JQL5 133 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 SSTP61278 116 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 ADIRFQ15847 76 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 WDR73Q6P4I2 378 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
TRAPPC1-206ENST00000573989 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 CRYGDP07320 174 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 ESRGQ1W209 222 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 UFSP1Q6NVU6 142 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 SAMD10Q9BYL1 202 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 SACSQ9NZJ4 4579 aa8.85□□□□□ -0.99
TRAPPC1-206ENST00000573989 CTRLP40313 264 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 RAB4BP61018 213 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 ZNF56Q15929 161 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 SMIM15Q7Z3B0 74 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-206ENST00000573989 DNAH1Q9P2D7 4330 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 FAM231BA6NCW3 169 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 F5H697 171 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 NTF3P20783 257 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 TWIST1Q15672 202 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 LYPD5Q6UWN5 251 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 C14orf178Q8N769 122 aaPredicted RBP8.83□□□□□ -1
TRAPPC1-206ENST00000573989 OR10G8Q8NGN5 311 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 TSKUQ8WUA8 353 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 UPK3BQ9BT76 320 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 CNFNQ9BYD5 112 aa8.83□□□□□ -1
TRAPPC1-206ENST00000573989 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
TRAPPC1-206ENST00000573989 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
TRAPPC1-206ENST00000573989 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
TRAPPC1-206ENST00000573989 Q6ZSN1 163 aa8.82□□□□□ -1
TRAPPC1-206ENST00000573989 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.82□□□□□ -1
TRAPPC1-206ENST00000573989 Q9H8V8 135 aa8.82□□□□□ -1
TRAPPC1-206ENST00000573989 HIGD1CA8MV81 97 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 H7C1H1 209 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 TIRAPP58753 221 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
TRAPPC1-206ENST00000573989 PNRC1Q12796 327 aaPredicted RBP8.81□□□□□ -1
TRAPPC1-206ENST00000573989 ATP6V0E2Q8NHE4 81 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 ZNRF2Q8NHG8 242 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 GTSF1Q8WW33 167 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
TRAPPC1-206ENST00000573989 PGLYRP4Q96LB8 373 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 V9GYV3 84 aa8.81□□□□□ -1
TRAPPC1-206ENST00000573989 KMT2AQ03164 3969 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GAGE12JA6NER3 117 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 MGPP08493 103 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GAGE1Q13065 139 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GAGE4Q13068 117 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GAGE5Q13069 117 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GAGE13Q4V321 117 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 TTC32Q5I0X7 151 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
TRAPPC1-206ENST00000573989 VPS13DQ5THJ4 4388 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 TRBV7-3A0A075B6L6 115 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 TRAV8-6A0A0B4J262 113 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 A0A1B0GUT8 65 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 M0R2N4 97 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 PPP1R2P9O14990 202 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 SIVA1O15304 175 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 EVI2AP22794 236 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 NAT8BQ9UHF3 227 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
TRAPPC1-206ENST00000573989 A0A087WWC5 75 aa8.78□□□□□ -1
TRAPPC1-206ENST00000573989 NBDYA0A0U1RRE5 68 aa8.78□□□□□ -1
TRAPPC1-206ENST00000573989 COMMD7Q86VX2 200 aa8.78□□□□□ -1
TRAPPC1-206ENST00000573989 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 F8W036 122 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 K7EP13 123 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 RIGQ13278 110 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 LELP1Q5T871 98 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 ANAPC16Q96DE5 110 aa8.77□□□□□ -1.01
TRAPPC1-206ENST00000573989 RYR2Q92736 4967 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 RYR3Q15413 4870 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 TMEM218A2RU14 115 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 LINC00315P59091 139 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 Q6ZR54 194 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
TRAPPC1-206ENST00000573989 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms