RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 FAM120AOSQ5T036 256 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 HCP5Q6MZN7 132 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 TXNDC17Q9BRA2 123 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 CRYBG3Q68DQ2 2970 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 TRAV12-2A0A075B6T6 113 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 H3BT86 120 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 HOXA3O43365 443 aaPredicted RBP6.78□□□□□ -1.32
TVP23A-205ENST00000572428 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
TVP23A-205ENST00000572428 C2orf83Q53S99 150 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 C19orf54Q5BKX5 351 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 ZNRD1Q9P1U0 126 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 CREBBPQ92793 2442 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 TRAV8-2A0A0B4J237 113 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 ODF3BA8MYP8 253 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 IGKCP01834 107 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 IGKV1-16P04430 117 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 NABP2Q9BQ15 211 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 SMIM7Q9BQ49 75 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 NOTCH3Q9UM47 2321 aa6.78□□□□□ -1.32
TVP23A-205ENST00000572428 TEX50A0A1B0GTY4 177 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 SAA1P0DJI8 122 aaPredicted RBP6.77□□□□□ -1.33
TVP23A-205ENST00000572428 GYPEP15421 78 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 TMEM167AQ8TBQ9 72 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 MGST2Q99735 147 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 MALRD1Q5VYJ5 2156 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 PDZD2O15018 2839 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 LRRK2Q5S007 2527 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 AMN1Q8IY45 258 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 TM2D3Q9BRN9 247 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 ARHGAP32A7KAX9 2087 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 APCSP02743 223 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 CACNG7P62955 275 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 ERHP84090 104 aaKnown RBP6.77□□□□□ -1.33
TVP23A-205ENST00000572428 ECSCRQ19T08 205 aa6.77□□□□□ -1.33
TVP23A-205ENST00000572428 CELSR2Q9HCU4 2923 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 NDUFA4L2Q9NRX3 87 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 VPS13CQ709C8 3753 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 PRRC2AP48634 2157 aaKnown RBP6.76□□□□□ -1.33
TVP23A-205ENST00000572428 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 IZUMO1RA6ND01 250 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 MORN3Q6PF18 240 aaPredicted RBP6.76□□□□□ -1.33
TVP23A-205ENST00000572428 HELZ2Q9BYK8 2649 aaKnown RBP6.76□□□□□ -1.33
TVP23A-205ENST00000572428 APCP25054 2843 aa6.76□□□□□ -1.33
TVP23A-205ENST00000572428 HLA-DMBP28068 263 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 TMEM158Q8WZ71 300 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 CENPEQ02224 2701 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 BUB1B-PAK6H3BSN5 160 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 BMPR1BO00238 502 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 FRMD6-AS1P0C7T7 363 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 ERCC8Q13216 396 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 MIC13Q5XKP0 118 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 GCN1Q92616 2671 aaKnown RBP6.75□□□□□ -1.33
TVP23A-205ENST00000572428 IGHV3-21A0A0B4J1V1 117 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 TRAV2A0A0B4J234 112 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 B4DSR2 109 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
TVP23A-205ENST00000572428 CENPWQ5EE01 88 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 LINC00305Q7Z4B0 112 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 VMO1Q7Z5L0 202 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 PGLYRP4Q96LB8 373 aa6.75□□□□□ -1.33
TVP23A-205ENST00000572428 TET2Q6N021 2002 aaPredicted RBP6.75□□□□□ -1.33
TVP23A-205ENST00000572428 CSMD2Q7Z408 3487 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 C11orf94C9JXX5 98 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 MSMBP08118 114 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 UPK3BQ9BT76 320 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 ANKRD17O75179 2603 aaKnown RBP6.74□□□□□ -1.33
TVP23A-205ENST00000572428 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
TVP23A-205ENST00000572428 IGLV2-23P01705 113 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 NSUN5P1Q3KNT7 163 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 MINOS1Q5TGZ0 78 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 TMEM75Q8N9X5 138 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 TIMM8BQ9Y5J9 83 aaPredicted RBP6.74□□□□□ -1.33
TVP23A-205ENST00000572428 MINOS1-NBL1R4GNA1 71 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 IGHV3-72A0A0B4J1Y9 119 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 FAM19A3Q7Z5A8 133 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 RNF5Q99942 180 aa6.74□□□□□ -1.33
TVP23A-205ENST00000572428 NHP2Q9NX24 153 aaKnown RBP6.74□□□□□ -1.33
TVP23A-205ENST00000572428 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 K7EMI3 77 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 ARL14EPLP0DKL9 152 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 Q6ZS46 218 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
TVP23A-205ENST00000572428 IGHV4-31P0DP07 118 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 NPC2P61916 151 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 GCHFRP30047 84 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 LAGE3Q14657 143 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 SERP1Q9Y6X1 66 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 FSHBP01225 129 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 CIRBPQ14011 172 aaKnown RBP6.72□□□□□ -1.33
TVP23A-205ENST00000572428 SBSPONQ8IVN8 264 aa6.72□□□□□ -1.33
TVP23A-205ENST00000572428 TRAV41A0A0B4J266 112 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms