RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
PFN1-202ENST00000572383 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
PFN1-202ENST00000572383 Q6ZSN1 163 aa12.53□□□□□ -0.4
PFN1-202ENST00000572383 FAM231DQ6ZW35 169 aa12.53□□□□□ -0.4
PFN1-202ENST00000572383 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
PFN1-202ENST00000572383 CRYGDP07320 174 aa12.52□□□□□ -0.41
PFN1-202ENST00000572383 ERVFC1-1P60608 527 aa12.52□□□□□ -0.41
PFN1-202ENST00000572383 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
PFN1-202ENST00000572383 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.41
PFN1-202ENST00000572383 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
PFN1-202ENST00000572383 RHOHQ15669 191 aa12.51□□□□□ -0.41
PFN1-202ENST00000572383 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
PFN1-202ENST00000572383 RHODO00212 210 aa12.5□□□□□ -0.41
PFN1-202ENST00000572383 SRIP30626 198 aa12.5□□□□□ -0.41
PFN1-202ENST00000572383 RPL23P62829 140 aaKnown RBP12.5□□□□□ -0.41
PFN1-202ENST00000572383 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
PFN1-202ENST00000572383 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
PFN1-202ENST00000572383 HECTD4Q9Y4D8 3996 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 F2Z2F3 143 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
PFN1-202ENST00000572383 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
PFN1-202ENST00000572383 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
PFN1-202ENST00000572383 CTRLP40313 264 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 CACNG7P62955 275 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 ADIRFQ15847 76 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 ISOC2Q96AB3 205 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 Q9UF83 564 aa12.48□□□□□ -0.41
PFN1-202ENST00000572383 M0R2N4 97 aa12.47□□□□□ -0.41
PFN1-202ENST00000572383 OSTCQ9NRP0 149 aa12.47□□□□□ -0.41
PFN1-202ENST00000572383 MRPS16Q9Y3D3 137 aaKnown RBP12.47□□□□□ -0.41
PFN1-202ENST00000572383 DNAH2Q9P225 4427 aa12.47□□□□□ -0.41
PFN1-202ENST00000572383 A8MWL6 223 aa12.46□□□□□ -0.41
PFN1-202ENST00000572383 NTF3P20783 257 aa12.46□□□□□ -0.41
PFN1-202ENST00000572383 CT83Q5H943 113 aa12.46□□□□□ -0.41
PFN1-202ENST00000572383 AP1S3Q96PC3 154 aa12.46□□□□□ -0.41
PFN1-202ENST00000572383 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
PFN1-202ENST00000572383 ZNF56Q15929 161 aa12.45□□□□□ -0.42
PFN1-202ENST00000572383 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
PFN1-202ENST00000572383 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 SMIM17P0DL12 118 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 RAB4BP61018 213 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 GAGE1Q13065 139 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 GAGE4Q13068 117 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 GAGE5Q13069 117 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 WDR73Q6P4I2 378 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 LINC00336Q6ZUF6 198 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 Q9H8V8 135 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 V9GYV3 84 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 DNAH17Q9UFH2 4485 aa12.44□□□□□ -0.42
PFN1-202ENST00000572383 LINC00315P59091 139 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 TWIST1Q15672 202 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 SH2D6Q7Z4S9 175 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 OR10G8Q8NGN5 311 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 TSKUQ8WUA8 353 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
PFN1-202ENST00000572383 F5H697 171 aa12.42□□□□□ -0.42
PFN1-202ENST00000572383 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
PFN1-202ENST00000572383 EVI2AP22794 236 aa12.42□□□□□ -0.42
PFN1-202ENST00000572383 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
PFN1-202ENST00000572383 FAT2Q9NYQ8 4349 aa12.42□□□□□ -0.42
PFN1-202ENST00000572383 MGPP08493 103 aa12.41□□□□□ -0.42
PFN1-202ENST00000572383 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
PFN1-202ENST00000572383 Q6ZR54 194 aa12.41□□□□□ -0.42
PFN1-202ENST00000572383 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
PFN1-202ENST00000572383 GFRA4Q9GZZ7 299 aa12.41□□□□□ -0.42
PFN1-202ENST00000572383 NBDYA0A0U1RRE5 68 aa12.4□□□□□ -0.42
PFN1-202ENST00000572383 HIGD1CA8MV81 97 aa12.4□□□□□ -0.42
PFN1-202ENST00000572383 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
PFN1-202ENST00000572383 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
PFN1-202ENST00000572383 UQCC3Q6UW78 93 aa12.39□□□□□ -0.43
PFN1-202ENST00000572383 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
PFN1-202ENST00000572383 SIVA1O15304 175 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 TIRAPP58753 221 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 WFDC10BQ8IUB3 73 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 BORCS7Q96B45 105 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
PFN1-202ENST00000572383 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
PFN1-202ENST00000572383 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
PFN1-202ENST00000572383 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
PFN1-202ENST00000572383 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
PFN1-202ENST00000572383 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
PFN1-202ENST00000572383 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
PFN1-202ENST00000572383 RTL8CO15255 209 aa12.36□□□□□ -0.43
PFN1-202ENST00000572383 UBE2D3P61077 147 aa12.36□□□□□ -0.43
PFN1-202ENST00000572383 UBE2D2P62837 147 aa12.36□□□□□ -0.43
PFN1-202ENST00000572383 KRTAP1-5Q9BYS1 174 aa12.36□□□□□ -0.43
PFN1-202ENST00000572383 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
PFN1-202ENST00000572383 SMIM27A0A1W2PRY6 76 aa12.35□□□□□ -0.43
PFN1-202ENST00000572383 TMEM218A2RU14 115 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms