RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 CCL21O00585 134 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 UBE2L6O14933 153 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 BAALC-AS2P0C853 105 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 BLCAPP62952 87 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 ERHP84090 104 aaKnown RBP4.81□□□□□ -1.64
KARS-211ENST00000569298 ESRGQ1W209 222 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 SMIM2Q9BVW6 85 aa4.81□□□□□ -1.64
KARS-211ENST00000569298 PTPRBP23467 1997 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 PCDH15Q96QU1 1955 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 IGHV5-51A0A0C4DH38 117 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 EFNA2O43921 213 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 SH2D1AO60880 128 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 DNAL4O96015 105 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 IGHV4-34P06331 123 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 Q0VFX4 171 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 NNATQ16517 81 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
KARS-211ENST00000569298 VPS13AQ96RL7 3174 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 IGLV4-69A0A075B6H9 119 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 C12orf77C9JDV5 145 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 M0R378 163 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
KARS-211ENST00000569298 SS18Q15532 418 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 Q6ZVQ6 151 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 TMEM61Q8N0U2 210 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 C11orf45Q8TAV5 145 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 LINC00474Q9P2X8 69 aa4.79□□□□□ -1.64
KARS-211ENST00000569298 FRYLO94915 3013 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 IGKV1D-37A0A075B6S9 117 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 IGKV3D-11A0A0A0MRZ8 115 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 K7EMT4 169 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 MIFP14174 115 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 UBE2BP63146 152 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 MIAQ16674 131 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 ECSCRQ19T08 205 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 C2orf66Q6UXQ4 117 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 FGF23Q9GZV9 251 aaPredicted RBP4.78□□□□□ -1.64
KARS-211ENST00000569298 LINC00588Q9Y4M8 146 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 SCN10AQ9Y5Y9 1956 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
KARS-211ENST00000569298 PRRC2BQ5JSZ5 2229 aaKnown RBP4.77□□□□□ -1.65
KARS-211ENST00000569298 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 E7EQL1 145 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 IGHV1-69P01742 117 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 DEFB103AP81534 67 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 TFF2Q03403 129 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 GGNQ86UU5 652 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 C17orf82Q86X59 251 aaPredicted RBP4.77□□□□□ -1.65
KARS-211ENST00000569298 LITAFQ99732 161 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 NDUFA4L2Q9NRX3 87 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 ADAMTS9Q9P2N4 1935 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 USP34Q70CQ2 3546 aa4.77□□□□□ -1.65
KARS-211ENST00000569298 CFAP54Q96N23 3096 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 LRP4O75096 1905 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 AGRNO00468 2067 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 IGHV1OR15-9A0A0B4J2B8 117 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 F8WEM9 126 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 H7C2G1 150 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 NTN3O00634 580 aaPredicted RBP4.76□□□□□ -1.65
KARS-211ENST00000569298 SPRY2O43597 315 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 PROP1O75360 226 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 CD28P10747 220 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
KARS-211ENST00000569298 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
KARS-211ENST00000569298 Q8NA96 180 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 RPP25Q9BUL9 199 aaKnown RBP4.76□□□□□ -1.65
KARS-211ENST00000569298 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
KARS-211ENST00000569298 SPRR3Q9UBC9 169 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 FREM3P0C091 2139 aa4.76□□□□□ -1.65
KARS-211ENST00000569298 BRWD1Q9NSI6 2320 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 E7EUB6 86 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 SOCS3O14543 225 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 ZNF32P17041 273 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 RPL28P46779 137 aaKnown RBP4.75□□□□□ -1.65
KARS-211ENST00000569298 UNQ9165/PRO28630Q6UXU0 137 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 LCA10Q71F78 164 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.75□□□□□ -1.65
KARS-211ENST00000569298 SPATA3Q8NHX4 192 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 CCL13Q99616 98 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 LINC00846Q9NV44 126 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 TET1Q8NFU7 2136 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 MYO15AQ9UKN7 3530 aa4.75□□□□□ -1.65
KARS-211ENST00000569298 COL5A1P20908 1838 aaPredicted RBP4.74□□□□□ -1.65
KARS-211ENST00000569298 MPDZO75970 2070 aa4.74□□□□□ -1.65
KARS-211ENST00000569298 DMDP11532 3685 aa4.74□□□□□ -1.65
KARS-211ENST00000569298 IGKV3D-7A0A0C4DH55 119 aa4.74□□□□□ -1.65
KARS-211ENST00000569298 IGHV5-10-1A0A0J9YXX1 117 aa4.74□□□□□ -1.65
KARS-211ENST00000569298 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
KARS-211ENST00000569298 CD59P13987 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms