RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 BTN1A1Q13410 526 aa5.69□□□□□ -1.5
CDH11-216ENST00000569128 RBMY1FQ15415 496 aaKnown RBP5.69□□□□□ -1.5
CDH11-216ENST00000569128 ZC2HC1AQ96GY0 325 aa5.69□□□□□ -1.5
CDH11-216ENST00000569128 C9JCJ5 164 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 SIVA1O15304 175 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 GCGP01275 180 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 CRISP2P16562 243 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 RPL23P62829 140 aaKnown RBP5.68□□□□□ -1.5
CDH11-216ENST00000569128 TMEM241Q24JQ0 296 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 C10orf91Q5T1B1 145 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 TMEM183AQ8IXX5 376 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 TUBA4BQ9H853 241 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 XCL2Q9UBD3 114 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 NAT8Q9UHE5 227 aa5.68□□□□□ -1.5
CDH11-216ENST00000569128 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 LOC102724200A0A096LPH7 203 aaPredicted RBP5.67□□□□□ -1.5
CDH11-216ENST00000569128 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 KLLNB2CW77 178 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 SH2D1AO60880 128 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 GPX1P07203 203 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 ADIRFQ15847 76 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 ZNF876PQ49A33 203 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 SMUG1Q53HV7 270 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 SAPCD1Q5SSQ6 148 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 ODF3Q96PU9 254 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 SEC11CQ9BY50 192 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
CDH11-216ENST00000569128 ZFP30Q9Y2G7 519 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 LENEPQ9Y5L5 61 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 MGAM2Q2M2H8 2515 aa5.67□□□□□ -1.5
CDH11-216ENST00000569128 C7orf71A4D174 169 aa5.66□□□□□ -1.5
CDH11-216ENST00000569128 ZNF324O75467 553 aaPredicted RBP5.66□□□□□ -1.5
CDH11-216ENST00000569128 APOC3P02656 99 aa5.66□□□□□ -1.5
CDH11-216ENST00000569128 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
CDH11-216ENST00000569128 DEFB121Q5J5C9 76 aa5.66□□□□□ -1.5
CDH11-216ENST00000569128 C1orf158Q8N1D5 194 aa5.66□□□□□ -1.5
CDH11-216ENST00000569128 NDFIP1Q9BT67 221 aa5.66□□□□□ -1.5
CDH11-216ENST00000569128 CARHSP1Q9Y2V2 147 aaKnown RBP5.66□□□□□ -1.5
CDH11-216ENST00000569128 TMSB15BA0A087X1C1 80 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 M0R036 132 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 TSPOP30536 169 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 Q6AWC8 147 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 ISOC2Q96AB3 205 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 RETNQ9HD89 108 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 TP53TG3Q9ULZ0 132 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 LY96Q9Y6Y9 160 aa5.65□□□□□ -1.5
CDH11-216ENST00000569128 NOTCH1P46531 2555 aa5.65□□□□□ -1.51
CDH11-216ENST00000569128 GRIFINA4D1Z8 144 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 FABP5P3A8MUU1 101 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 ZNF705GA8MUZ8 300 aaPredicted RBP5.64□□□□□ -1.51
CDH11-216ENST00000569128 KRBOX1C9JBD0 128 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 GNRH2O43555 120 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 GZMBP10144 247 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 HTN1P15515 57 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 AZU1P20160 251 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 FAM162BQ5T6X4 162 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 UFSP1Q6NVU6 142 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
CDH11-216ENST00000569128 MRAPQ8TCY5 172 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 LINC01587Q99440 93 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 NAGKQ9UJ70 344 aa5.64□□□□□ -1.51
CDH11-216ENST00000569128 A0A087X002 238 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 TRAV21A0A0B4J279 112 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 IGHV3-16A0A0C4DH30 117 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 KIR2DL5BA0A0G2JN68 375 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 KIR2DL5BA0A0G2JPC4 375 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 PPP1R2P9O14990 202 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 GATCO43716 136 aaKnown RBP5.63□□□□□ -1.51
CDH11-216ENST00000569128 HSBP1O75506 76 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 INSP01308 110 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 ORM1P02763 201 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 PFN1P07737 140 aaKnown RBP5.63□□□□□ -1.51
CDH11-216ENST00000569128 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 CFC1P0CG37 223 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 APOC4P55056 127 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 NUTF2P61970 127 aaKnown RBP5.63□□□□□ -1.51
CDH11-216ENST00000569128 DEFA6Q01524 100 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 VAMP3Q15836 100 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 DEFB135Q30KP9 77 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 RNF212Q495C1 297 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 SBSPONQ8IVN8 264 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 KIR2DL5AQ8N109 375 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 SMIM12Q96EX1 92 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 SFRP2Q96HF1 295 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 V9GYV3 84 aa5.63□□□□□ -1.51
CDH11-216ENST00000569128 NBEAL1Q6ZS30 2694 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 IGHV1OR15-1A0A075B7D0 117 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 TMEM189A5PLL7 270 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 B4DEV8 164 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 P01737 135 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 PMCHP20382 165 aa5.62□□□□□ -1.51
CDH11-216ENST00000569128 IBA57Q5T440 356 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms