RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 UBE2D2P62837 147 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 SLC48A1Q6P1K1 146 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 C6orf201Q7Z4U5 140 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 RTL8AQ9BWD3 113 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 ANAPC10Q9UM13 185 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 S4R3C0 116 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 TANC2Q9HCD6 1990 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 SHANK1Q9Y566 2161 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 A0A0G2JMZ2 1700 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 LRRC37A2A6NM11 1700 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 LRRC37AA6NMS7 1700 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 TEX49A0A1B0GTD5 131 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 RPL30P62888 115 aaKnown RBP3.28□□□□□ -1.88
UBR1-208ENST00000569066 SERF2P84101 59 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 LY6EQ16553 131 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 PRR15Q8IV56 129 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 DCANP1Q8TF63 244 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 CHCHD1Q96BP2 118 aaKnown RBP3.28□□□□□ -1.88
UBR1-208ENST00000569066 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 BRWD3Q6RI45 1802 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 C8orf87E5RJ46 101 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 SYNGR2O43760 224 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
UBR1-208ENST00000569066 LGALS9BQ3B8N2 356 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 LY6G5BQ8NDX9 201 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 LINC00474Q9P2X8 69 aa3.28□□□□□ -1.88
UBR1-208ENST00000569066 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
UBR1-208ENST00000569066 MPDZO75970 2070 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 MYMXA0A1B0GTQ4 84 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 SLC25A20O43772 301 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 HIST1H4AP62805 103 aaKnown RBP3.27□□□□□ -1.89
UBR1-208ENST00000569066 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 MIR7-3HGQ8N6C7 128 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 NMNAT3Q96T66 252 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 SPANXDQ9BXN6 97 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 PAPPA2Q9BXP8 1791 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 COL27A1Q8IZC6 1860 aaPredicted RBP3.27□□□□□ -1.89
UBR1-208ENST00000569066 CPAMD8Q8IZJ3 1885 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 CACNA1DQ01668 2161 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 PLXNB1O43157 2135 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 IGHV3OR15-7A0A075B7D8 119 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 A0A1B0GXF2 115 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 SMIM27A0A1W2PRY6 76 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 PGPA6NDG6 321 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 ZNF22P17026 224 aaPredicted RBP3.27□□□□□ -1.89
UBR1-208ENST00000569066 CD24P25063 80 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 NPC2P61916 151 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 FXYD3Q14802 87 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 HES3Q5TGS1 186 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 TRGV9Q99603 122 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 THADAQ6YHU6 1953 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 EML6Q6ZMW3 1958 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 GREB1Q4ZG55 1949 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 KMT2EQ8IZD2 1858 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
UBR1-208ENST00000569066 CTXND1A0A1B0GTU2 59 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 KNCNA6PVL3 124 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 H3BP45 60 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 HMGN4O00479 90 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 LHBP01229 141 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 INAFM2P0DMQ5 153 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 DEFA4P12838 97 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 SNRPD3P62318 126 aaKnown RBP3.26□□□□□ -1.89
UBR1-208ENST00000569066 HBG1P69891 147 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 MIC13Q5XKP0 118 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 LYPD6Q86Y78 171 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 RNASE6Q93091 150 aaKnown RBP3.26□□□□□ -1.89
UBR1-208ENST00000569066 TIMM8BQ9Y5J9 83 aaPredicted RBP3.26□□□□□ -1.89
UBR1-208ENST00000569066 EML5Q05BV3 1969 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 IGLV3-12A0A075B6K2 115 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 IZUMO1RA6ND01 250 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 CCL16O15467 120 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 NPYP01303 97 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 QRFPP83859 136 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 FAM222AQ5U5X8 452 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 TM2D3Q9BRN9 247 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 SPTBP11277 2137 aa3.26□□□□□ -1.89
UBR1-208ENST00000569066 TRBV7-3A0A075B6L6 115 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 LOC389332A0A1B0GUA5 103 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 MARCH3Q86UD3 253 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 OR5AS1Q8N127 324 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 CCL17Q92583 94 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 LINC01600Q96MT4 127 aa3.25□□□□□ -1.89
UBR1-208ENST00000569066 TRGV5A0A0B4J1U4 118 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 ATOX1O00244 68 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 LINC00305Q7Z4B0 112 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 FAM223AQ8IWN6 122 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 ST20-AS1Q8NBB2 130 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 SMCR5Q8TEV8 140 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 C11orf68Q9H3H3 251 aaKnown RBP3.24□□□□□ -1.89
UBR1-208ENST00000569066 TAS2R4Q9NYW5 299 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 LY96Q9Y6Y9 160 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms