RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 Q9UF83 564 aa19.82■□□□□ 0.76
RAB40C-211ENST00000568586 RPL35P42766 123 aaKnown RBP19.81■□□□□ 0.76
RAB40C-211ENST00000568586 C14orf178Q8N769 122 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-211ENST00000568586 KRTAP17-1Q9BYP8 105 aa19.81■□□□□ 0.76
RAB40C-211ENST00000568586 TEX46H3BTG2 121 aa19.8■□□□□ 0.76
RAB40C-211ENST00000568586 ERVFC1-1P60608 527 aa19.8■□□□□ 0.76
RAB40C-211ENST00000568586 OR10J3Q5JRS4 329 aa19.8■□□□□ 0.76
RAB40C-211ENST00000568586 SSBP4Q9BWG4 385 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-211ENST00000568586 IBA57-AS1B1ANH7 110 aa19.79■□□□□ 0.76
RAB40C-211ENST00000568586 GAGE12JA6NER3 117 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 M0R381 172 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 GAGE1Q13065 139 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 GAGE4Q13068 117 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 GAGE5Q13069 117 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 GAGE13Q4V321 117 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 PGPEP1Q9NXJ5 209 aa19.78■□□□□ 0.76
RAB40C-211ENST00000568586 SNAI2O43623 268 aa19.77■□□□□ 0.76
RAB40C-211ENST00000568586 RPL19P84098 196 aaKnown RBP19.77■□□□□ 0.76
RAB40C-211ENST00000568586 DERL1Q9BUN8 251 aa19.77■□□□□ 0.76
RAB40C-211ENST00000568586 A0A087WTM6 91 aa19.76■□□□□ 0.75
RAB40C-211ENST00000568586 EREGO14944 169 aa19.76■□□□□ 0.75
RAB40C-211ENST00000568586 A0A087WWL8 130 aa19.75■□□□□ 0.75
RAB40C-211ENST00000568586 OR5AL1P0C617 328 aa19.75■□□□□ 0.75
RAB40C-211ENST00000568586 FAM74A4Q5TZK3 123 aa19.75■□□□□ 0.75
RAB40C-211ENST00000568586 A0A087WWC5 75 aa19.74■□□□□ 0.75
RAB40C-211ENST00000568586 TRBV10-1A0A0K0K1A3 114 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 IGLV2-8P01709 118 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 MEF2BQ02080 365 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-211ENST00000568586 CDPF1Q6NVV7 123 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 AKAP14Q86UN6 197 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 OR10AG1Q8NH19 301 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 SMIM12Q96EX1 92 aa19.73■□□□□ 0.75
RAB40C-211ENST00000568586 PDE6DO43924 150 aa19.72■□□□□ 0.75
RAB40C-211ENST00000568586 PRR27Q6MZM9 219 aa19.72■□□□□ 0.75
RAB40C-211ENST00000568586 C9orf62Q8N4C0 152 aa19.72■□□□□ 0.75
RAB40C-211ENST00000568586 LAGE3Q14657 143 aa19.71■□□□□ 0.75
RAB40C-211ENST00000568586 CENPWQ5EE01 88 aa19.71■□□□□ 0.75
RAB40C-211ENST00000568586 IFNA1P01562 189 aa19.69■□□□□ 0.74
RAB40C-211ENST00000568586 BCL2P10415 239 aa19.69■□□□□ 0.74
RAB40C-211ENST00000568586 ABCA13Q86UQ4 5058 aa19.69■□□□□ 0.74
RAB40C-211ENST00000568586 IGHV3-30P01768 117 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 IGHV3-33P01772 117 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 IGHV3-30-3P0DP02 117 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 IGHV3-30-5P0DP03 117 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 RAB4BP61018 213 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 OR10G8Q8NGN5 311 aa19.68■□□□□ 0.74
RAB40C-211ENST00000568586 C19orf71A6NCJ1 209 aa19.67■□□□□ 0.74
RAB40C-211ENST00000568586 TAGLN2P37802 199 aaKnown RBP19.67■□□□□ 0.74
RAB40C-211ENST00000568586 VAX2Q9UIW0 290 aa19.67■□□□□ 0.74
RAB40C-211ENST00000568586 RAB19A4D1S5 217 aa19.66■□□□□ 0.74
RAB40C-211ENST00000568586 LRCOL1A6NCL2 159 aa19.66■□□□□ 0.74
RAB40C-211ENST00000568586 UBE2D3P61077 147 aa19.66■□□□□ 0.74
RAB40C-211ENST00000568586 UBE2D2P62837 147 aa19.66■□□□□ 0.74
RAB40C-211ENST00000568586 TRBV20OR9-2A0A075B6H5 130 aa19.65■□□□□ 0.74
RAB40C-211ENST00000568586 TRBV7-3A0A075B6L6 115 aa19.65■□□□□ 0.74
RAB40C-211ENST00000568586 GNG4P50150 75 aa19.65■□□□□ 0.74
RAB40C-211ENST00000568586 RPL36AP83881 106 aaKnown RBP19.65■□□□□ 0.74
RAB40C-211ENST00000568586 Q8N3U1 123 aa19.65■□□□□ 0.74
RAB40C-211ENST00000568586 RPL36ALQ969Q0 106 aaKnown RBP19.65■□□□□ 0.74
RAB40C-211ENST00000568586 IGLC6P0CF74 106 aa19.64■□□□□ 0.73
RAB40C-211ENST00000568586 SPANXN1Q5VSR9 72 aa19.64■□□□□ 0.73
RAB40C-211ENST00000568586 KRTAP4-5Q9BYR2 181 aa19.64■□□□□ 0.73
RAB40C-211ENST00000568586 MED9Q9NWA0 146 aa19.64■□□□□ 0.73
RAB40C-211ENST00000568586 KIF25-AS1Q9Y6Z4 181 aa19.64■□□□□ 0.73
RAB40C-211ENST00000568586 RPS20P60866 119 aaKnown RBP19.63■□□□□ 0.73
RAB40C-211ENST00000568586 DAZAP1Q96EP5 407 aaKnown RBP19.62■□□□□ 0.73
RAB40C-211ENST00000568586 Q9HAA7 133 aa19.62■□□□□ 0.73
RAB40C-211ENST00000568586 hCG_2014768A0A024R1R8 64 aa19.61■□□□□ 0.73
RAB40C-211ENST00000568586 MUC21A0A0G2JKD1 596 aa19.61■□□□□ 0.73
RAB40C-211ENST00000568586 MUC21A0A140T8X8 626 aa19.61■□□□□ 0.73
RAB40C-211ENST00000568586 PSCAO43653 123 aa19.61■□□□□ 0.73
RAB40C-211ENST00000568586 FUSP35637 526 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■□□ 19.1
RAB40C-211ENST00000568586 NIT1Q86X76 327 aa19.61■□□□□ 0.73
RAB40C-211ENST00000568586 DAZ4Q86SG3 579 aaKnown RBP19.6■□□□□ 0.73
RAB40C-211ENST00000568586 OR2D3Q8NGH3 330 aa19.6■□□□□ 0.73
RAB40C-211ENST00000568586 BIN3Q9NQY0 253 aa19.6■□□□□ 0.73
RAB40C-211ENST00000568586 DAZ3Q9NR90 486 aaKnown RBP19.6■□□□□ 0.73
RAB40C-211ENST00000568586 TRAV8-3A0A0A6YYJ7 113 aa19.59■□□□□ 0.73
RAB40C-211ENST00000568586 MAPKAPK5-AS1Q8N8E1 139 aa19.59■□□□□ 0.73
RAB40C-211ENST00000568586 NEXN-AS1Q8NBZ9 246 aa19.59■□□□□ 0.73
RAB40C-211ENST00000568586 LYPD6BQ8NI32 183 aa19.59■□□□□ 0.73
RAB40C-211ENST00000568586 TM2D2Q9BX73 214 aa19.59■□□□□ 0.73
RAB40C-211ENST00000568586 ZNF56Q15929 161 aa19.58■□□□□ 0.72
RAB40C-211ENST00000568586 TOR2AQ5JU69 321 aa19.58■□□□□ 0.72
RAB40C-211ENST00000568586 FER1L6-AS1Q8NA97 138 aa19.58■□□□□ 0.72
RAB40C-211ENST00000568586 CHCHD7Q9BUK0 85 aa19.58■□□□□ 0.72
RAB40C-211ENST00000568586 GZMBP10144 247 aa19.57■□□□□ 0.72
RAB40C-211ENST00000568586 Q8N1X5 172 aa19.57■□□□□ 0.72
RAB40C-211ENST00000568586 AP1S3Q96PC3 154 aa19.57■□□□□ 0.72
RAB40C-211ENST00000568586 P01737 135 aa19.56■□□□□ 0.72
RAB40C-211ENST00000568586 BLOC1S1P78537 153 aa19.56■□□□□ 0.72
RAB40C-211ENST00000568586 XKRY2A2RUG3 117 aa19.55■□□□□ 0.72
RAB40C-211ENST00000568586 RBFOX3A6NFN3 312 aa19.55■□□□□ 0.72
RAB40C-211ENST00000568586 F2Z2F3 143 aa19.55■□□□□ 0.72
RAB40C-211ENST00000568586 ALKAL2Q6UX46 152 aa19.55■□□□□ 0.72
RAB40C-211ENST00000568586 NTN5Q8WTR8 489 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-211ENST00000568586 KRTAP10-1P60331 282 aa19.54■□□□□ 0.72
RAB40C-211ENST00000568586 CACNG7P62955 275 aa19.54■□□□□ 0.72
RAB40C-211ENST00000568586 TRBV6-8A0A0A6YYG3 113 aa19.53■□□□□ 0.72
RAB40C-211ENST00000568586 SMIM17P0DL12 118 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms