RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
TSC2-220ENST00000568238 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
TSC2-220ENST00000568238 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
TSC2-220ENST00000568238 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
TSC2-220ENST00000568238 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 LINC00862A6NCI5 91 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 SSTP61278 116 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 UQCC3Q6UW78 93 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 FAM231DQ6ZW35 169 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 SYT8Q8NBV8 401 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 OR10AG1Q8NH19 301 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 ZNF479Q96JC4 524 aa8.89□□□□□ -0.99
TSC2-220ENST00000568238 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 CFAP126Q5VTH2 177 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 ZFP82Q8N141 532 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 PTH2Q96A98 100 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 JPT2Q9H910 190 aa8.88□□□□□ -0.99
TSC2-220ENST00000568238 IGHV3-73A0A0B4J1V6 119 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 TRGV4A0A0C4DH28 118 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 RS1O15537 224 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 PAX4O43316 350 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 SNAI2O43623 268 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 OR5AL1P0C617 328 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 C15orf54Q8N8G6 183 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 SFRP2Q96HF1 295 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
TSC2-220ENST00000568238 TMEM218A2RU14 115 aa8.86□□□□□ -0.99
TSC2-220ENST00000568238 SLAQ13239 276 aa8.86□□□□□ -0.99
TSC2-220ENST00000568238 FHL2Q14192 279 aa8.86□□□□□ -0.99
TSC2-220ENST00000568238 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
TSC2-220ENST00000568238 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
TSC2-220ENST00000568238 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
TSC2-220ENST00000568238 A0A087WWL8 130 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 A8MWL6 223 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 A8MWV9 139 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 NXPH4O95158 308 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 ADCYAP1P18509 176 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
TSC2-220ENST00000568238 CT83Q5H943 113 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 FAM74A4Q5TZK3 123 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 OR10G8Q8NGN5 311 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 SAMD10Q9BYL1 202 aa8.85□□□□□ -0.99
TSC2-220ENST00000568238 F8W036 122 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 CTRLP40313 264 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 CRYBA4P53673 196 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 PGLYRP4Q96LB8 373 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 HHLA3Q9XRX5 114 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 V9GYV3 84 aa8.84□□□□□ -0.99
TSC2-220ENST00000568238 F2Z2F3 143 aa8.83□□□□□ -1
TSC2-220ENST00000568238 SIVA1O15304 175 aa8.83□□□□□ -1
TSC2-220ENST00000568238 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
TSC2-220ENST00000568238 CACNG7P62955 275 aa8.83□□□□□ -1
TSC2-220ENST00000568238 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
TSC2-220ENST00000568238 SPATA12Q7Z6I5 190 aa8.83□□□□□ -1
TSC2-220ENST00000568238 TSKUQ8WUA8 353 aa8.83□□□□□ -1
TSC2-220ENST00000568238 AP1S3Q96PC3 154 aa8.83□□□□□ -1
TSC2-220ENST00000568238 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
TSC2-220ENST00000568238 RHODO00212 210 aa8.82□□□□□ -1
TSC2-220ENST00000568238 LINC00315P59091 139 aa8.82□□□□□ -1
TSC2-220ENST00000568238 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
TSC2-220ENST00000568238 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
TSC2-220ENST00000568238 ZFP2Q6ZN57 461 aa8.82□□□□□ -1
TSC2-220ENST00000568238 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
TSC2-220ENST00000568238 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
TSC2-220ENST00000568238 HIGD1CA8MV81 97 aa8.81□□□□□ -1
TSC2-220ENST00000568238 CDK2AP2O75956 126 aa8.81□□□□□ -1
TSC2-220ENST00000568238 CRYGDP07320 174 aa8.81□□□□□ -1
TSC2-220ENST00000568238 NTF3P20783 257 aa8.81□□□□□ -1
TSC2-220ENST00000568238 SRIP30626 198 aa8.81□□□□□ -1
TSC2-220ENST00000568238 TWIST1Q15672 202 aa8.81□□□□□ -1
TSC2-220ENST00000568238 Q6ZSN1 163 aa8.81□□□□□ -1
TSC2-220ENST00000568238 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
TSC2-220ENST00000568238 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
TSC2-220ENST00000568238 GFRA4Q9GZZ7 299 aa8.81□□□□□ -1
TSC2-220ENST00000568238 K7EQD1 137 aa8.8□□□□□ -1
TSC2-220ENST00000568238 CIDEAO60543 219 aa8.8□□□□□ -1
TSC2-220ENST00000568238 SMIM17P0DL12 118 aa8.8□□□□□ -1
TSC2-220ENST00000568238 GYPEP15421 78 aa8.8□□□□□ -1
TSC2-220ENST00000568238 ZNF56Q15929 161 aa8.8□□□□□ -1
TSC2-220ENST00000568238 LYPD5Q6UWN5 251 aa8.8□□□□□ -1
TSC2-220ENST00000568238 BORCS7Q96B45 105 aa8.8□□□□□ -1
TSC2-220ENST00000568238 SEC11CQ9BY50 192 aa8.8□□□□□ -1
TSC2-220ENST00000568238 CNFNQ9BYD5 112 aa8.8□□□□□ -1
TSC2-220ENST00000568238 FAM231BA6NCW3 169 aa8.79□□□□□ -1
TSC2-220ENST00000568238 PPP1R2P9O14990 202 aa8.79□□□□□ -1
TSC2-220ENST00000568238 MT-ND4LP03901 98 aa8.79□□□□□ -1
TSC2-220ENST00000568238 MGPP08493 103 aa8.79□□□□□ -1
TSC2-220ENST00000568238 TRGC1P0CF51 173 aa8.79□□□□□ -1
TSC2-220ENST00000568238 RHOHQ15669 191 aa8.79□□□□□ -1
TSC2-220ENST00000568238 WDR73Q6P4I2 378 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms