RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 K7EQG2 157 aa17.44■□□□□ 0.38
LINC00543-201ENST00000567234 FCER1GP30273 86 aa17.44■□□□□ 0.38
LINC00543-201ENST00000567234 AMN1Q8IY45 258 aa17.44■□□□□ 0.38
LINC00543-201ENST00000567234 F6UB75 175 aa17.43■□□□□ 0.38
LINC00543-201ENST00000567234 SNRPD3P62318 126 aaKnown RBP17.43■□□□□ 0.38
LINC00543-201ENST00000567234 MAP1LC3AQ9H492 121 aa17.43■□□□□ 0.38
LINC00543-201ENST00000567234 IGHV4-4A0A075B6R2 117 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 GCSHP23434 173 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 DEFB1P60022 68 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 ODF3Q96PU9 254 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 ODF1Q14990 250 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 WFDC3Q8IUB2 231 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 ATP6V0E2Q8NHE4 81 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 HHLA3Q9XRX5 114 aa17.42■□□□□ 0.38
LINC00543-201ENST00000567234 CKS2P33552 79 aa17.41■□□□□ 0.38
LINC00543-201ENST00000567234 ESM1Q9NQ30 184 aa17.41■□□□□ 0.38
LINC00543-201ENST00000567234 IGKCP01834 107 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 FXYD2P54710 66 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 TMEM160Q9NX00 188 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 SELENOKQ9Y6D0 94 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 KLLNB2CW77 178 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 DPM2O94777 84 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 C18orf65Q6ZTR6 163 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 MSRB1Q9NZV6 116 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 PEMTQ9UBM1 199 aa17.4■□□□□ 0.38
LINC00543-201ENST00000567234 TSSC4Q9Y5U2 329 aaPredicted RBP17.4■□□□□ 0.38
LINC00543-201ENST00000567234 LOC389332A0A1B0GUA5 103 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 IGLL5B9A064 214 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 MED14OSP0DP75 135 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 SLURP1P55000 103 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 Q6ZQT7 251 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 NAA38Q9BRA0 125 aaKnown RBP17.39■□□□□ 0.37
LINC00543-201ENST00000567234 GTSF1LQ9H1H1 148 aa17.39■□□□□ 0.37
LINC00543-201ENST00000567234 A0A1B0GWB2 263 aa17.38■□□□□ 0.37
LINC00543-201ENST00000567234 OR11H1Q8NG94 326 aa17.38■□□□□ 0.37
LINC00543-201ENST00000567234 RNF185Q96GF1 192 aa17.38■□□□□ 0.37
LINC00543-201ENST00000567234 TRBV25-1A0A075B6N4 114 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 ZNF688P0C7X2 276 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 RNASE4P34096 147 aaKnown RBP17.37■□□□□ 0.37
LINC00543-201ENST00000567234 DEFB136Q30KP8 78 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 A0A0J9YX75 114 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 RNASE1P07998 156 aaKnown RBP17.37■□□□□ 0.37
LINC00543-201ENST00000567234 SMAGPQ0VAQ4 97 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 MRAP2Q96G30 205 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 ZNF479Q96JC4 524 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 VCX2Q9H322 139 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 DKK2Q9UBU2 259 aa17.37■□□□□ 0.37
LINC00543-201ENST00000567234 TRAV2A0A0B4J234 112 aa17.36■□□□□ 0.37
LINC00543-201ENST00000567234 PRSS47A8MTI9 375 aa17.36■□□□□ 0.37
LINC00543-201ENST00000567234 INAFM1C9JVW0 142 aa17.36■□□□□ 0.37
LINC00543-201ENST00000567234 J3KRW8 73 aa17.36■□□□□ 0.37
LINC00543-201ENST00000567234 NSD1Q96L73 2696 aaPredicted RBP17.36■□□□□ 0.37
LINC00543-201ENST00000567234 NPYP01303 97 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 LEPP41159 167 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 KLHL30-AS1Q8NEE0 82 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 C16orf95Q9H693 158 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 F8P00451 2351 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 ASIPP42127 132 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 KHDC1LQ5JSQ8 128 aa17.35■□□□□ 0.37
LINC00543-201ENST00000567234 DUSP14O95147 198 aaKnown RBP17.34■□□□□ 0.37
LINC00543-201ENST00000567234 ANXA2RQ3ZCQ2 193 aa17.34■□□□□ 0.37
LINC00543-201ENST00000567234 GAGE13Q4V321 117 aa17.34■□□□□ 0.37
LINC00543-201ENST00000567234 SPANXN1Q5VSR9 72 aa17.34■□□□□ 0.37
LINC00543-201ENST00000567234 H3BVH4 76 aa17.33■□□□□ 0.37
LINC00543-201ENST00000567234 FN1P02751 2386 aaKnown RBP17.33■□□□□ 0.36
LINC00543-201ENST00000567234 NHP2Q9NX24 153 aaKnown RBP17.33■□□□□ 0.36
LINC00543-201ENST00000567234 S100A4P26447 101 aaKnown RBP17.32■□□□□ 0.36
LINC00543-201ENST00000567234 RRN3P1Q2M238 152 aa17.32■□□□□ 0.36
LINC00543-201ENST00000567234 PLNP26678 52 aa17.31■□□□□ 0.36
LINC00543-201ENST00000567234 CKS1BP61024 79 aa17.31■□□□□ 0.36
LINC00543-201ENST00000567234 C12orf74Q32Q52 190 aa17.31■□□□□ 0.36
LINC00543-201ENST00000567234 Q8N8P6 123 aa17.31■□□□□ 0.36
LINC00543-201ENST00000567234 ZNF418Q8TF45 676 aaPredicted RBP17.31■□□□□ 0.36
LINC00543-201ENST00000567234 SPAG8Q99932 426 aaPredicted RBP17.31■□□□□ 0.36
LINC00543-201ENST00000567234 MRPL16Q9NX20 251 aaKnown RBP17.31■□□□□ 0.36
LINC00543-201ENST00000567234 PRO0461Q9UI25 63 aa17.31■□□□□ 0.36
LINC00543-201ENST00000567234 DLX4Q92988 240 aaPredicted RBP17.31■□□□□ 0.36
LINC00543-201ENST00000567234 IGKV2D-26A0A0A0MRZ7 120 aa17.3■□□□□ 0.36
LINC00543-201ENST00000567234 WFDC2Q14508 124 aa17.3■□□□□ 0.36
LINC00543-201ENST00000567234 NF1P21359 2839 aa17.3■□□□□ 0.36
LINC00543-201ENST00000567234 PRSS1P07477 247 aa17.29■□□□□ 0.36
LINC00543-201ENST00000567234 SMKR1H3BMG3 65 aa17.28■□□□□ 0.36
LINC00543-201ENST00000567234 HILS1P60008 231 aa17.28■□□□□ 0.36
LINC00543-201ENST00000567234 FAM159AQ6UWV7 190 aa17.28■□□□□ 0.36
LINC00543-201ENST00000567234 DUX3Q96PT4 197 aa17.28■□□□□ 0.36
LINC00543-201ENST00000567234 PHLDA3Q9Y5J5 127 aa17.28■□□□□ 0.36
LINC00543-201ENST00000567234 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.27■□□□□ 0.36
LINC00543-201ENST00000567234 FHL3Q13643 280 aa17.27■□□□□ 0.36
LINC00543-201ENST00000567234 ZC2HC1BQ5TFG8 222 aa17.27■□□□□ 0.36
LINC00543-201ENST00000567234 TMEM158Q8WZ71 300 aa17.27■□□□□ 0.36
LINC00543-201ENST00000567234 TRAV12-1A0A0B4J245 112 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 TNFRSF6BO95407 300 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 RNASE3P12724 160 aaKnown RBP17.26■□□□□ 0.35
LINC00543-201ENST00000567234 LYRM7Q5U5X0 104 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 LINC01006Q8NI28 216 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 CYSLTR1Q9Y271 337 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 H3BMG7 143 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 GNRH2O43555 120 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 DYNLRB2Q8TF09 96 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 RAX2Q96IS3 184 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms