RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SAMD10Q9BYL1 202 aa11.11□□□□□ -0.63
RAB40C-208ENST00000564703 K7EQD1 137 aa11.1□□□□□ -0.63
RAB40C-208ENST00000564703 ADIRFQ15847 76 aa11.1□□□□□ -0.63
RAB40C-208ENST00000564703 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
RAB40C-208ENST00000564703 F5H697 171 aa11.09□□□□□ -0.63
RAB40C-208ENST00000564703 NXPH4O95158 308 aa11.09□□□□□ -0.63
RAB40C-208ENST00000564703 CRYGDP07320 174 aa11.09□□□□□ -0.63
RAB40C-208ENST00000564703 RPL23P62829 140 aaKnown RBP11.09□□□□□ -0.63
RAB40C-208ENST00000564703 ESRGQ1W209 222 aa11.09□□□□□ -0.63
RAB40C-208ENST00000564703 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
RAB40C-208ENST00000564703 CT83Q5H943 113 aa11.08□□□□□ -0.64
RAB40C-208ENST00000564703 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
RAB40C-208ENST00000564703 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
RAB40C-208ENST00000564703 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
RAB40C-208ENST00000564703 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
RAB40C-208ENST00000564703 TRGC1P0CF51 173 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 NTF3P20783 257 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 RAB4BP61018 213 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 TWIST1Q15672 202 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 ZNF56Q15929 161 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 LYPD5Q6UWN5 251 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
RAB40C-208ENST00000564703 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
RAB40C-208ENST00000564703 UQCC3Q6UW78 93 aa11.06□□□□□ -0.64
RAB40C-208ENST00000564703 Q6ZSN1 163 aa11.06□□□□□ -0.64
RAB40C-208ENST00000564703 SMIM15Q7Z3B0 74 aa11.06□□□□□ -0.64
RAB40C-208ENST00000564703 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
RAB40C-208ENST00000564703 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 PGLYRP4Q96LB8 373 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 Q9H8V8 135 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 MSRB1Q9NZV6 116 aa11.05□□□□□ -0.64
RAB40C-208ENST00000564703 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
RAB40C-208ENST00000564703 IGLV2-18A0A075B6J9 118 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 CTRLP40313 264 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GAGE1Q13065 139 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GAGE4Q13068 117 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GAGE5Q13069 117 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 GTSF1Q8WW33 167 aa11.04□□□□□ -0.64
RAB40C-208ENST00000564703 TRBV10-1A0A0K0K1A3 114 aa11.03□□□□□ -0.64
RAB40C-208ENST00000564703 M0R2N4 97 aa11.03□□□□□ -0.64
RAB40C-208ENST00000564703 MGPP08493 103 aa11.03□□□□□ -0.64
RAB40C-208ENST00000564703 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
RAB40C-208ENST00000564703 ZNRF2Q8NHG8 242 aa11.03□□□□□ -0.64
RAB40C-208ENST00000564703 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
RAB40C-208ENST00000564703 HIGD1CA8MV81 97 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 EVI2AP22794 236 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.65
RAB40C-208ENST00000564703 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
RAB40C-208ENST00000564703 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 V9GYV3 84 aa11.02□□□□□ -0.65
RAB40C-208ENST00000564703 H7C1H1 209 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 GTSF1LQ9H1H1 148 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 KIF25-AS1Q9Y6Z4 181 aa11.01□□□□□ -0.65
RAB40C-208ENST00000564703 DYNC2H1Q8NCM8 4307 aaKnown RBP11.01□□□□□ -0.65
RAB40C-208ENST00000564703 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
RAB40C-208ENST00000564703 TRBV7-3A0A075B6L6 115 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 TRAV8-6A0A0B4J262 113 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 A0A1B0GUT8 65 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 SIVA1O15304 175 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 TIRAPP58753 221 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 RIGQ13278 110 aa11□□□□□ -0.65
RAB40C-208ENST00000564703 PLECQ15149 4684 aaKnown RBP11□□□□□ -0.65
RAB40C-208ENST00000564703 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
RAB40C-208ENST00000564703 F8W036 122 aa10.99□□□□□ -0.65
RAB40C-208ENST00000564703 MT-ND4LP03901 98 aa10.99□□□□□ -0.65
RAB40C-208ENST00000564703 TNFRSF18Q9Y5U5 241 aa10.99□□□□□ -0.65
RAB40C-208ENST00000564703 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 NBDYA0A0U1RRE5 68 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 LINC00315P59091 139 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 OR10J3Q5JRS4 329 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 Q9UF83 564 aa10.98□□□□□ -0.65
RAB40C-208ENST00000564703 A0A087WWC5 75 aa10.97□□□□□ -0.65
RAB40C-208ENST00000564703 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
RAB40C-208ENST00000564703 ANAPC16Q96DE5 110 aa10.97□□□□□ -0.65
RAB40C-208ENST00000564703 SMIM27A0A1W2PRY6 76 aa10.96□□□□□ -0.65
RAB40C-208ENST00000564703 LELP1Q5T871 98 aa10.96□□□□□ -0.65
RAB40C-208ENST00000564703 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.65
RAB40C-208ENST00000564703 M0QY20 66 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 C1orf134Q5TEV5 83 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 SUMO4Q6EEV6 95 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 Q6ZR54 194 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 NEXN-AS1Q8NBZ9 246 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
RAB40C-208ENST00000564703 UBE2D3P61077 147 aa10.94□□□□□ -0.66
RAB40C-208ENST00000564703 UBE2D2P62837 147 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms