RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 C2orf66Q6UXQ4 117 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 NFE4Q86UQ8 179 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 NDUFA11Q86Y39 141 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 RNF182Q8N6D2 247 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 Q8N6K4 173 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 PRRC2AP48634 2157 aaKnown RBP3.56□□□□□ -1.84
CAPN3-212ENST00000564503 ZFHX2Q9C0A1 2572 aaPredicted RBP3.56□□□□□ -1.84
CAPN3-212ENST00000564503 NCOR2Q9Y618 2525 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 WDFY3Q8IZQ1 3526 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 USP9XQ93008 2570 aaPredicted RBP3.55□□□□□ -1.84
CAPN3-212ENST00000564503 TRAV21A0A0B4J279 112 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 A0A0J9YY99 117 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 C11orf86A6NJI1 115 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 TCL1BO95988 128 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 PRTN3P24158 256 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 ASIPP42127 132 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 NDPQ00604 133 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 PMVKQ15126 192 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 MINOS1Q5TGZ0 78 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 ZFP2Q6ZN57 461 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 TEX29Q8N6K0 151 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 RASL10AQ92737 203 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 EEF1AKMT3Q96AZ1 226 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 RNF183Q96D59 192 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 TIMD4Q96H15 378 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 LINC00477Q96M19 166 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 METTL26Q96S19 204 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 MINOS1-NBL1R4GNA1 71 aa3.55□□□□□ -1.84
CAPN3-212ENST00000564503 MAP1BP46821 2468 aaKnown RBP3.54□□□□□ -1.84
CAPN3-212ENST00000564503 TRBV7-1A0A0A6YYK4 115 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV7-81A0A0B4J1V7 117 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 LYNX1G3V0Z9 82 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 OVOL1O14753 267 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 SLC25A20O43772 301 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV3-30P01768 117 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 MGPP08493 103 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 P0DMU3 169 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 FAM231AP0DMU4 169 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 FAM231CP0DMU5 169 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV3-30-5P0DP03 117 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 LYNX1P0DP58 116 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 S100A4P26447 101 aaKnown RBP3.54□□□□□ -1.84
CAPN3-212ENST00000564503 CFHR3Q02985 330 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 GAGE5Q13069 117 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 GAGE6Q13070 117 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 C15orf32Q32M92 178 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 Q6Q795 121 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 VMO1Q7Z5L0 202 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 ANKRD29Q8N6D5 301 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 SLC25A29Q8N8R3 303 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 DEFB124Q8NES8 71 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 NRGNQ92686 78 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 PTH2Q96A98 100 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 RPL39LQ96EH5 51 aaKnown RBP3.54□□□□□ -1.84
CAPN3-212ENST00000564503 LINC01600Q96MT4 127 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 TIMM17AQ99595 171 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 UBTD1Q9HAC8 227 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 SPANXA1Q9NS26 97 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 PRO1854Q9UHT4 67 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 PHLDA3Q9Y5J5 127 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 SPEGQ15772 3267 aa3.54□□□□□ -1.84
CAPN3-212ENST00000564503 GCN1Q92616 2671 aaKnown RBP3.54□□□□□ -1.84
CAPN3-212ENST00000564503 USP24Q9UPU5 2620 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 URB1O60287 2271 aaKnown RBP3.53□□□□□ -1.84
CAPN3-212ENST00000564503 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV3OR16-8A0A075B7F1 116 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 A0A087WW49 117 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.53□□□□□ -1.84
CAPN3-212ENST00000564503 A0A0B4J2C4 111 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 TRBV7-9A0A0J9YWB2 115 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 CLPSL1A2RUU4 121 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 RHODO00212 210 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 VCYO14598 125 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 LEPROTO15243 131 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 SNCGO76070 127 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 NXPH4O95158 308 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 CRYGDP07320 174 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 CFC1BP0CG36 223 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 CFC1P0CG37 223 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 LGALS3P17931 250 aaKnown RBP3.53□□□□□ -1.84
CAPN3-212ENST00000564503 SRD5A1P18405 259 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 PRR9Q5T870 116 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
CAPN3-212ENST00000564503 Q8N9W7 124 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 ITLN2Q8WWU7 325 aaPredicted RBP3.53□□□□□ -1.84
CAPN3-212ENST00000564503 ZNF580Q9UK33 172 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
CAPN3-212ENST00000564503 ABCA1O95477 2261 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms