RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
CMTM3-207ENST00000564060 SNAI2O43623 268 aa13.52□□□□□ -0.25
CMTM3-207ENST00000564060 LELP1Q5T871 98 aa13.52□□□□□ -0.25
CMTM3-207ENST00000564060 RPS20P60866 119 aaKnown RBP13.51□□□□□ -0.25
CMTM3-207ENST00000564060 SPANXN1Q5VSR9 72 aa13.51□□□□□ -0.25
CMTM3-207ENST00000564060 Q6ZSN1 163 aa13.51□□□□□ -0.25
CMTM3-207ENST00000564060 SSBP4Q9BWG4 385 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-207ENST00000564060 PKD1P98161 4303 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 A0A087WWL8 130 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 GAGE12JA6NER3 117 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 CRYGDP07320 174 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 GAGE1Q13065 139 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 GAGE4Q13068 117 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 GAGE5Q13069 117 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 GAGE13Q4V321 117 aa13.5□□□□□ -0.25
CMTM3-207ENST00000564060 TRBV10-1A0A0K0K1A3 114 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 LINC00694P0DN24 101 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 LINC01556Q5JQF7 62 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 C14orf178Q8N769 122 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-207ENST00000564060 OR10AG1Q8NH19 301 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 MSRB1Q9NZV6 116 aa13.49□□□□□ -0.25
CMTM3-207ENST00000564060 A0A087WWC5 75 aa13.48□□□□□ -0.25
CMTM3-207ENST00000564060 A0A1B0GVG6 124 aa13.48□□□□□ -0.25
CMTM3-207ENST00000564060 C19orf71A6NCJ1 209 aa13.47□□□□□ -0.25
CMTM3-207ENST00000564060 P01737 135 aa13.47□□□□□ -0.25
CMTM3-207ENST00000564060 RAB4BP61018 213 aa13.47□□□□□ -0.25
CMTM3-207ENST00000564060 Q6ZRN7 208 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-207ENST00000564060 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
CMTM3-207ENST00000564060 LYPD6BQ8NI32 183 aa13.47□□□□□ -0.25
CMTM3-207ENST00000564060 PKHD1P08F94 4074 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 TRBV20OR9-2A0A075B6H5 130 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 RBFOX3A6NFN3 312 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 EREGO14944 169 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 SMIM17P0DL12 118 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 NKX2-5P52952 324 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-207ENST00000564060 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
CMTM3-207ENST00000564060 ZNF56Q15929 161 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
CMTM3-207ENST00000564060 AP1S3Q96PC3 154 aa13.46□□□□□ -0.25
CMTM3-207ENST00000564060 C16orf90A8MZG2 172 aa13.45□□□□□ -0.26
CMTM3-207ENST00000564060 ERVFC1-1P60608 527 aa13.45□□□□□ -0.26
CMTM3-207ENST00000564060 FER1L6-AS1Q8NA97 138 aa13.45□□□□□ -0.26
CMTM3-207ENST00000564060 CACNG7P62955 275 aa13.44□□□□□ -0.26
CMTM3-207ENST00000564060 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
CMTM3-207ENST00000564060 F2Z2F3 143 aa13.43□□□□□ -0.26
CMTM3-207ENST00000564060 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
CMTM3-207ENST00000564060 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-207ENST00000564060 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
CMTM3-207ENST00000564060 DNAH11Q96DT5 4516 aa13.43□□□□□ -0.26
CMTM3-207ENST00000564060 IBA57-AS1B1ANH7 110 aa13.42□□□□□ -0.26
CMTM3-207ENST00000564060 NDUFS6O75380 124 aaKnown RBP13.42□□□□□ -0.26
CMTM3-207ENST00000564060 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
CMTM3-207ENST00000564060 OR10G8Q8NGN5 311 aa13.42□□□□□ -0.26
CMTM3-207ENST00000564060 Q9UF83 564 aa13.42□□□□□ -0.26
CMTM3-207ENST00000564060 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
CMTM3-207ENST00000564060 MUC21A0A0G2JKD1 596 aa13.41□□□□□ -0.26
CMTM3-207ENST00000564060 MUC21A0A140T8X8 626 aa13.41□□□□□ -0.26
CMTM3-207ENST00000564060 GZMBP10144 247 aa13.41□□□□□ -0.26
CMTM3-207ENST00000564060 LAGE3Q14657 143 aa13.41□□□□□ -0.26
CMTM3-207ENST00000564060 F5H697 171 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 IGHV3-33P01772 117 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 SSTP61278 116 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 TOR2AQ5JU69 321 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 NUDT10Q8NFP7 164 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 NUDT11Q96G61 164 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 EIF5A2Q9GZV4 153 aaKnown RBP13.4□□□□□ -0.26
CMTM3-207ENST00000564060 URGCP-MRPS24S4R325 110 aa13.4□□□□□ -0.26
CMTM3-207ENST00000564060 DYNC1H1Q14204 4646 aaKnown RBP13.39□□□□□ -0.27
CMTM3-207ENST00000564060 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
CMTM3-207ENST00000564060 UBE2D3P61077 147 aa13.39□□□□□ -0.27
CMTM3-207ENST00000564060 UBE2D2P62837 147 aa13.39□□□□□ -0.27
CMTM3-207ENST00000564060 OCC1Q8TAD7 63 aa13.39□□□□□ -0.27
CMTM3-207ENST00000564060 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
CMTM3-207ENST00000564060 PSCAO43653 123 aa13.38□□□□□ -0.27
CMTM3-207ENST00000564060 FAM210AQ96ND0 272 aa13.38□□□□□ -0.27
CMTM3-207ENST00000564060 H7C1H1 209 aa13.37□□□□□ -0.27
CMTM3-207ENST00000564060 CEBPGP53567 150 aa13.37□□□□□ -0.27
CMTM3-207ENST00000564060 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
CMTM3-207ENST00000564060 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
CMTM3-207ENST00000564060 KIF25-AS1Q9Y6Z4 181 aa13.37□□□□□ -0.27
CMTM3-207ENST00000564060 K7EN84 100 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 CTRLP40313 264 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 WDR73Q6P4I2 378 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 LYZL1Q6UWQ5 148 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 CHCHD7Q9BUK0 85 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
CMTM3-207ENST00000564060 PGPEP1Q9NXJ5 209 aa13.36□□□□□ -0.27
CMTM3-207ENST00000564060 A0A087WTM6 91 aa13.35□□□□□ -0.27
CMTM3-207ENST00000564060 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
CMTM3-207ENST00000564060 MGPP08493 103 aa13.35□□□□□ -0.27
CMTM3-207ENST00000564060 TM2D2Q9BX73 214 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms