RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 IGHV3-33P01772 117 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 HMGN2P05204 90 aaKnown RBP3.21□□□□□ -1.9
CHD9-206ENST00000562791 INAFM2P0DMQ5 153 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 PLNP26678 52 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 ZNF80P51504 273 aaPredicted RBP3.21□□□□□ -1.9
CHD9-206ENST00000562791 CXCL6P80162 114 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 RBM3P98179 157 aaKnown RBP3.21□□□□□ -1.9
CHD9-206ENST00000562791 FXYD3Q14802 87 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 RHOHQ15669 191 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 FAM223AQ8IWN6 122 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 DEFB106AQ8N104 65 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 Q8N7P7 452 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 WFDC5Q8TCV5 224 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 DIRC1Q969H9 104 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 ARHGAP5-AS1Q96IT6 56 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 CCL13Q99616 98 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 MRPL35Q9NZE8 188 aaKnown RBP3.21□□□□□ -1.9
CHD9-206ENST00000562791 LINC00474Q9P2X8 69 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 TAC3Q9UHF0 121 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 KIF25-AS1Q9Y6Z4 181 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 R4GMQ9 66 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 U3KQK5 164 aa3.21□□□□□ -1.9
CHD9-206ENST00000562791 MGAMO43451 1857 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 TDRD6O60522 2096 aaKnown RBP3.2□□□□□ -1.9
CHD9-206ENST00000562791 TRAV7A0A075B6U4 112 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.2□□□□□ -1.9
CHD9-206ENST00000562791 TRBV10-3A0A0K0K1G6 114 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 LOC100131303A0A0U1RQF7 123 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 H0Y9J4 135 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 CISD3P0C7P0 127 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 ARL14EPLP0DKL9 152 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 NDPQ00604 133 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 ESRGQ1W209 222 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 NSUN5P1Q3KNT7 163 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 CLEC19AQ6UXS0 136 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 VMO1Q7Z5L0 202 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 CSNK1G2-AS1Q8NCQ2 148 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 LRP4O75096 1905 aa3.2□□□□□ -1.9
CHD9-206ENST00000562791 PHF3Q92576 2039 aaKnown RBP3.19□□□□□ -1.9
CHD9-206ENST00000562791 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 IGKV1D-43A0A0B4J1Z2 117 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 TRAV12-1A0A0B4J245 112 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 FAM223BA6NKX1 122 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 C4orf51C9J302 202 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 CCL22O00626 93 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 FSTL3O95633 263 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 COX6CP09669 75 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 CCL4P13236 92 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 PLGLAQ15195 96 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.19□□□□□ -1.9
CHD9-206ENST00000562791 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 ZNF818PQ6ZRF7 136 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 FAM19A3Q7Z5A8 133 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 PFN4Q8NHR9 129 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 TIMM21Q9BVV7 248 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 RPP21Q9H633 154 aaKnown RBP3.19□□□□□ -1.9
CHD9-206ENST00000562791 PROK2Q9HC23 129 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 UBE2D4Q9Y2X8 147 aa3.19□□□□□ -1.9
CHD9-206ENST00000562791 MDC1Q14676 2089 aaKnown RBP3.18□□□□□ -1.9
CHD9-206ENST00000562791 IGKV1D-17A0A075B6S4 117 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 IGKV1D-8A0A087WSZ0 117 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 IGHV3OR16-9A0A0B4J2B5 98 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 IGHV3-16A0A0C4DH30 117 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 K7EMI3 77 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 K7EQG2 157 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 COX7A2LO14548 114 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 PIRTP0C851 137 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 HMGA1P17096 107 aaKnown RBP3.18□□□□□ -1.9
CHD9-206ENST00000562791 UBE2AP49459 152 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 MP68P56378 58 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 EIF4EBP1Q13541 118 aaPredicted RBP3.18□□□□□ -1.9
CHD9-206ENST00000562791 MRPL51Q4U2R6 128 aaKnown RBP3.18□□□□□ -1.9
CHD9-206ENST00000562791 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 C9orf66Q5T8R8 295 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 DYNAPQ8N1N2 210 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 C20orf197Q8N268 126 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 DYNLRB2Q8TF09 96 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
CHD9-206ENST00000562791 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 ESM1Q9NQ30 184 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 ZNF355PQ9NSJ1 428 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 POLEQ07864 2286 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 ATG2BQ96BY7 2078 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 THADAQ6YHU6 1953 aa3.18□□□□□ -1.9
CHD9-206ENST00000562791 COL18A1P39060 1754 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 LTBP2Q14767 1821 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGLV1-36A0A0B4J1U3 117 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGHV1OR15-9A0A0B4J2B8 117 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 TRBV5-4A0A0C4DH59 114 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 TMEM30CPA0ZSE6 113 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 A6NN06 94 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGKV1-5P01602 117 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGHV3-30P01768 117 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGHV4-34P06331 123 aa3.17□□□□□ -1.9
CHD9-206ENST00000562791 IGHV3-30-5P0DP03 117 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms