RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 LINC01546A6NGU7 62 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 HBDP02042 147 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 Q6ZN92 141 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 C3orf56Q8N813 242 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 DCANP1Q8TF63 244 aa8.72□□□□□ -1.01
PCAT1-202ENST00000561978 SMKR1H3BMG3 65 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
PCAT1-202ENST00000561978 RNASE4P34096 147 aaKnown RBP8.71□□□□□ -1.02
PCAT1-202ENST00000561978 ASIPP42127 132 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 HNRNPA3P51991 378 aaKnown RBP8.71□□□□□ -1.02
PCAT1-202ENST00000561978 PROK1P58294 105 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 SNRPD3P62318 126 aaKnown RBP8.71□□□□□ -1.02
PCAT1-202ENST00000561978 PRR9Q5T870 116 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 Q8N2B8 174 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 C11orf44Q8N8P7 122 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 MS4A6AQ9H2W1 248 aa8.71□□□□□ -1.02
PCAT1-202ENST00000561978 TIMM8BQ9Y5J9 83 aaPredicted RBP8.71□□□□□ -1.02
PCAT1-202ENST00000561978 NCR2O95944 276 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 IGLL1P15814 213 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 AZU1P20160 251 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 TFPI2P48307 235 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 SPATA3Q8NHX4 192 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 EVI2AP22794 236 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 DEFB125Q8N687 156 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
PCAT1-202ENST00000561978 MRPS16Q9Y3D3 137 aaKnown RBP8.7□□□□□ -1.02
PCAT1-202ENST00000561978 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
PCAT1-202ENST00000561978 H3BVH4 76 aa8.69□□□□□ -1.02
PCAT1-202ENST00000561978 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
PCAT1-202ENST00000561978 OR2K2Q8NGT1 345 aa8.69□□□□□ -1.02
PCAT1-202ENST00000561978 PHLDA3Q9Y5J5 127 aa8.69□□□□□ -1.02
PCAT1-202ENST00000561978 NOTCH3Q9UM47 2321 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 A0A096LNJ9 63 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 KLLNB2CW77 178 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 F6UB75 175 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 LEPP41159 167 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 SYNJ2BPP57105 145 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 GAGE5Q13069 117 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 GAGE6Q13070 117 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 Q8N8P6 123 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
PCAT1-202ENST00000561978 FCER1GP30273 86 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 TSPOP30536 169 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 HOXD3P31249 432 aaPredicted RBP8.68□□□□□ -1.02
PCAT1-202ENST00000561978 SAMD5Q5TGI4 173 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 Q6ZQT7 251 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 OR1N2Q8NGR9 330 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
PCAT1-202ENST00000561978 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 A0A087WW49 117 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 K7EQG2 157 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 DEFB1P60022 68 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 BATFQ16520 125 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 IFI27L1Q96BM0 104 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 DPH3P1Q9H4G8 78 aa8.67□□□□□ -1.02
PCAT1-202ENST00000561978 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
PCAT1-202ENST00000561978 PPP1R17O96001 155 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 EDN2P20800 178 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 SEC61GP60059 68 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 PSMG4Q5JS54 123 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 ERASQ7Z444 233 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 CMYA5Q8N3K9 4069 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 NRACQ8N912 160 aa8.66□□□□□ -1.02
PCAT1-202ENST00000561978 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 A0A0J9YX75 114 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 M0R381 172 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 ZNF688P0C7X2 276 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 CD28P10747 220 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 SLC25A34Q6PIV7 304 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 PMCHL2Q9BQD1 86 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 PEMTQ9UBM1 199 aa8.65□□□□□ -1.02
PCAT1-202ENST00000561978 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 C7orf71A4D174 169 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 LINC01619G3V211 115 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 K7EMI3 77 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 GNRH2O43555 120 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
PCAT1-202ENST00000561978 LAGE3Q14657 143 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 RNASE3P12724 160 aaKnown RBP8.64□□□□□ -1.03
PCAT1-202ENST00000561978 SMAGPQ0VAQ4 97 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 STPG4Q8N801 248 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 C4orf3Q8WVX3 66 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
PCAT1-202ENST00000561978 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
PCAT1-202ENST00000561978 ATP5LO75964 103 aa8.63□□□□□ -1.03
PCAT1-202ENST00000561978 NXPH4O95158 308 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms