RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 C4orf33Q8N1A6 199 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 DYNLRB2Q8TF09 96 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 SKA2Q8WVK7 121 aaPredicted RBP-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 BATF3Q9NR55 127 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 GID8Q9NWU2 228 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 TRAPPC2LQ9UL33 140 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 V9GYQ6 96 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 V9GYV3 84 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 F5P12259 2224 aa-0.23□□□□□ -2.45
HMBOX1-216ENST00000561377 LAMB1P07942 1786 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 PLXNA2O75051 1894 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 A0A087WTM6 91 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 J3KT08 172 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 J3QLW9 94 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 M0R3E3 92 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 TCRAP04437 139 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 ACYP2P14621 99 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 Q5VSD8 79 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 PPP1R2P3Q6NXS1 205 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 TMEM91Q6ZNR0 172 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 Q6ZRX8 168 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 SNX29P2Q8IUI4 249 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 TMEM35BQ8NCS4 154 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 COX7B2Q8TF08 81 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 SPANXA1Q9NS26 97 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 CALML5Q9NZT1 146 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 SMPXQ9UHP9 88 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 PRO0255Q9UI72 69 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 NOP16Q9Y3C1 178 aaKnown RBP-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 DOPEY2Q9Y3R5 2298 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 PTPRMP28827 1452 aa-0.24□□□□□ -2.45
HMBOX1-216ENST00000561377 TRBV10-3A0A0K0K1G6 114 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 A0A1B0GX51 115 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 M0R2P5 195 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 SMIM24O75264 130 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 SCTP09683 121 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 HLA-DRB4P13762 266 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 RPL7P18124 248 aaKnown RBP-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 RPS28P62857 69 aaKnown RBP-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 SPCS2Q15005 226 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 DEFB109BQ30KR1 87 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 TMEM128Q5BJH2 165 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 Q5VV11 94 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 ATP11AUNQ6ZP68 121 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 C20orf197Q8N268 126 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 HLA-DRB4X5D2U9 266 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 ZNF609O15014 1411 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 DAPK1P53355 1430 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 HELZP42694 1942 aaKnown RBP-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 VWFP04275 2813 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 MAP1AP78559 2803 aaPredicted RBP-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 MUC12Q9UKN1 5478 aa-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 DSTQ03001 7570 aaKnown RBP-0.25□□□□□ -2.45
HMBOX1-216ENST00000561377 HECTD4Q9Y4D8 3996 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 PIEZO2Q9H5I5 2752 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 SETXQ7Z333 2677 aaKnown RBP-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 APC2O95996 2303 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 LRRC37A3O60309 1634 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 GOLGA3Q08378 1498 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 ALMS1Q8TCU4 4167 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 ZNF815PA8K554 130 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 H0YJX3 145 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 IFNA17P01571 189 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 PAEPP09466 180 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 SMIM6P0DI80 62 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 SLC25A6P12236 298 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 S100GP29377 79 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 TCTE3Q8IZS6 198 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 IFI27L1Q96BM0 104 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 Q96NJ1 140 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 DDA1Q9BW61 102 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 BANF2Q9H503 90 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 HSPB11Q9Y547 144 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 DNAJC15Q9Y5T4 150 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 SPCS1Q9Y6A9 102 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 STAB2Q8WWQ8 2551 aa-0.26□□□□□ -2.45
HMBOX1-216ENST00000561377 PXDNQ92626 1479 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 PTPRQQ9UMZ3 2332 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 PKDREJQ9NTG1 2253 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 TRAV36DV7A0A075B6V5 113 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 TRAV12-3A0A0B4J271 114 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 TSTD3H0UI37 97 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 DBIP07108 87 aaKnown RBP-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 SPANXN1Q5VSR9 72 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 SSBP3-AS1Q7Z2R9 100 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 CDC26Q8NHZ8 85 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 SAR1AQ9NR31 198 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 PLXNA1Q9UIW2 1896 aa-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
HMBOX1-216ENST00000561377 NBEAL1Q6ZS30 2694 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 BCL9LQ86UU0 1499 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 C2CD3Q4AC94 2353 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 XIRP1Q702N8 1843 aaKnown RBP-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 TRBV20-1A0A075B6N2 111 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 TRGV1A0A0A0MS02 117 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 TRAV1-2A0A0B4J238 106 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 TRAV22A0A0B4J277 110 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 APOC4-APOC2K7ER74 178 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms