RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 ANK2Q01484 3957 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 D6R8Y8 96 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 RHODO00212 210 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 MGPP08493 103 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 MIFP14174 115 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 NOP10Q9NPE3 64 aaKnown RBP7.43□□□□□ -1.22
USP3-219ENST00000561326 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 U3KQK5 164 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 NBEAL1Q6ZS30 2694 aa7.43□□□□□ -1.22
USP3-219ENST00000561326 A0A087WWL8 130 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 TRGV1A0A0A0MS02 117 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 H7C1H1 209 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 CIDEAO60543 219 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 CRYGDP07320 174 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 DEFB121Q5J5C9 76 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 MRPL16Q9NX20 251 aaKnown RBP7.42□□□□□ -1.22
USP3-219ENST00000561326 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 X6R8D5 127 aa7.42□□□□□ -1.22
USP3-219ENST00000561326 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 SNRPEP62304 92 aaKnown RBP7.41□□□□□ -1.22
USP3-219ENST00000561326 ZNF56Q15929 161 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
USP3-219ENST00000561326 ZFP2Q6ZN57 461 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 POM121L12Q8N7R1 296 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 OR4C5Q8NGB2 326 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 C18orf32Q8TCD1 76 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 JPT2Q9H910 190 aa7.41□□□□□ -1.22
USP3-219ENST00000561326 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 C5orf52A6NGY3 159 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 LYRM9A8MSI8 78 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 RS1O15537 224 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 TNFRSF6BO95407 300 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 HOXA5P20719 270 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 EMP1P54849 157 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 LINC00315P59091 139 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 CFAP126Q5VTH2 177 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 Q6ZTI0 123 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.22
USP3-219ENST00000561326 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 GAGE12BA1L429 117 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 PLAC8L1A1L4L8 177 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 GAGE7O76087 117 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 GAGE12FP0CL80 117 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 GAGE12GP0CL81 117 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 GAGE12IP0CL82 117 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 S100A2P29034 98 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 SAMD10Q9BYL1 202 aa7.39□□□□□ -1.23
USP3-219ENST00000561326 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 IGHV4-28A0A0C4DH34 117 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 K7EIL1 84 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 NCR2O95944 276 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 NPYP01303 97 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 LINC00614P0C842 121 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 SPART-AS1P0CW21 52 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 PMCHP20382 165 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 NIT1Q86X76 327 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 CHCHD1Q96BP2 118 aaKnown RBP7.38□□□□□ -1.23
USP3-219ENST00000561326 C20orf78Q9BR46 151 aa7.38□□□□□ -1.23
USP3-219ENST00000561326 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
USP3-219ENST00000561326 LOC389332A0A1B0GUA5 103 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 PRSS47A8MTI9 375 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 SERF1AO75920 110 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 PRB2P02812 416 aaPredicted RBP7.37□□□□□ -1.23
USP3-219ENST00000561326 IQCJQ1A5X6 159 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 EDA2RQ9HAV5 297 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 ST20Q9HBF5 79 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 NIT2Q9NQR4 276 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
USP3-219ENST00000561326 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 M0QY20 66 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 HSBP1O75506 76 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 ESDP10768 282 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
USP3-219ENST00000561326 IFI27P40305 119 aaPredicted RBP7.36□□□□□ -1.23
USP3-219ENST00000561326 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
USP3-219ENST00000561326 FAM222AQ5U5X8 452 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
USP3-219ENST00000561326 NRACQ8N912 160 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 Q8NAQ8 132 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 TMEM18Q96B42 140 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 AP5S1Q9NUS5 200 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 DKK2Q9UBU2 259 aa7.36□□□□□ -1.23
USP3-219ENST00000561326 TRGV4A0A0C4DH28 118 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms