RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ARL14EPLP0DKL9 152 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 PKIAP61925 76 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
TPM1-226ENST00000560959 PPP1R1CQ8WVI7 109 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 SFRP2Q96HF1 295 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 HMGB3O15347 200 aaKnown RBP11.83□□□□□ -0.52
TPM1-226ENST00000560959 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
TPM1-226ENST00000560959 RAB2AP61019 212 aa11.83□□□□□ -0.52
TPM1-226ENST00000560959 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
TPM1-226ENST00000560959 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
TPM1-226ENST00000560959 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.52
TPM1-226ENST00000560959 CCDC32Q9BV29 185 aa11.83□□□□□ -0.52
TPM1-226ENST00000560959 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
TPM1-226ENST00000560959 ARMS2P0C7Q2 107 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 PET100P0DJ07 73 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 FAM74A4Q5TZK3 123 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 MZT2BQ6NZ67 158 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 OR11H4Q8NGC9 324 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
TPM1-226ENST00000560959 B4DEV8 164 aa11.81□□□□□ -0.52
TPM1-226ENST00000560959 H3BVH4 76 aa11.81□□□□□ -0.52
TPM1-226ENST00000560959 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
TPM1-226ENST00000560959 CDC34P49427 236 aaPredicted RBP11.81□□□□□ -0.52
TPM1-226ENST00000560959 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
TPM1-226ENST00000560959 A0A087WWL8 130 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 MPC2O95563 127 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 GCHFRP30047 84 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 H2BFSP57053 126 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
TPM1-226ENST00000560959 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
TPM1-226ENST00000560959 KRBOX1C9JBD0 128 aa11.79□□□□□ -0.52
TPM1-226ENST00000560959 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
TPM1-226ENST00000560959 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
TPM1-226ENST00000560959 ARL2-SNX15V9GYD0 113 aa11.79□□□□□ -0.52
TPM1-226ENST00000560959 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
TPM1-226ENST00000560959 COX8CQ7Z4L0 72 aa11.78□□□□□ -0.52
TPM1-226ENST00000560959 PHLDA3Q9Y5J5 127 aa11.78□□□□□ -0.52
TPM1-226ENST00000560959 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
TPM1-226ENST00000560959 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
TPM1-226ENST00000560959 CXorf1O96002 111 aa11.76□□□□□ -0.53
TPM1-226ENST00000560959 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
TPM1-226ENST00000560959 CRIP1P50238 77 aa11.76□□□□□ -0.53
TPM1-226ENST00000560959 RAB4BP61018 213 aa11.76□□□□□ -0.53
TPM1-226ENST00000560959 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
TPM1-226ENST00000560959 DPH3Q96FX2 82 aa11.76□□□□□ -0.53
TPM1-226ENST00000560959 A0A087WYN8 130 aa11.75□□□□□ -0.53
TPM1-226ENST00000560959 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
TPM1-226ENST00000560959 MBP02144 154 aa11.75□□□□□ -0.53
TPM1-226ENST00000560959 ZFP82Q8N141 532 aa11.75□□□□□ -0.53
TPM1-226ENST00000560959 CHCHD5Q9BSY4 110 aa11.75□□□□□ -0.53
TPM1-226ENST00000560959 IGHV3-64A0A075B6Q5 118 aa11.74□□□□□ -0.53
TPM1-226ENST00000560959 M0R381 172 aa11.74□□□□□ -0.53
TPM1-226ENST00000560959 PTTG1O95997 202 aa11.74□□□□□ -0.53
TPM1-226ENST00000560959 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
TPM1-226ENST00000560959 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
TPM1-226ENST00000560959 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
TPM1-226ENST00000560959 GRIFINA4D1Z8 144 aa11.73□□□□□ -0.53
TPM1-226ENST00000560959 SERF2P84101 59 aa11.73□□□□□ -0.53
TPM1-226ENST00000560959 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
TPM1-226ENST00000560959 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
TPM1-226ENST00000560959 ZFP30Q9Y2G7 519 aa11.73□□□□□ -0.53
TPM1-226ENST00000560959 M0R036 132 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 RBX1P62877 108 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 FAM162BQ5T6X4 162 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 Q86TA4 180 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 LINC00269Q8N2A0 174 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 ENKURQ8TC29 256 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
TPM1-226ENST00000560959 SH2D1AO60880 128 aa11.71□□□□□ -0.53
TPM1-226ENST00000560959 HIST1H2BAQ96A08 127 aa11.71□□□□□ -0.53
TPM1-226ENST00000560959 NKX6-2Q9C056 277 aaPredicted RBP11.71□□□□□ -0.53
TPM1-226ENST00000560959 VAX2Q9UIW0 290 aa11.71□□□□□ -0.53
TPM1-226ENST00000560959 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 PHOX2AO14813 284 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 IFNA7P01567 189 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 P01737 135 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 LINC00299Q6ZSB3 139 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 NTM-AS1Q6ZSK4 140 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
TPM1-226ENST00000560959 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
TPM1-226ENST00000560959 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
TPM1-226ENST00000560959 INMT-MINDY4F8WBC2 141 aa11.69□□□□□ -0.54
TPM1-226ENST00000560959 PEX7O00628 323 aa11.69□□□□□ -0.54
TPM1-226ENST00000560959 GZMBP10144 247 aa11.69□□□□□ -0.54
TPM1-226ENST00000560959 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
TPM1-226ENST00000560959 SLPIP03973 132 aa11.68□□□□□ -0.54
TPM1-226ENST00000560959 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
TPM1-226ENST00000560959 TRBV25-1A0A075B6N4 114 aa11.67□□□□□ -0.54
TPM1-226ENST00000560959 CHTF8P0CG12 524 aa11.67□□□□□ -0.54
TPM1-226ENST00000560959 REG3AQ06141 175 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms