RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 LYRM9A8MSI8 78 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 HIGD1CA8MV81 97 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 M0R2P5 195 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 GZMBP10144 247 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 CACNG7P62955 275 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 ZNF415Q09FC8 603 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 C21orf62-AS1Q17RA5 79 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 LYZL1Q6UWQ5 148 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 ATP5L2Q7Z4Y8 100 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 POM121L12Q8N7R1 296 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 FER1L6-AS1Q8NA97 138 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 NUP35Q8NFH5 326 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 GSN-AS1Q9NRJ2 163 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 DKK2Q9UBU2 259 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 NAT8BQ9UHF3 227 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 TIMM8BQ9Y5J9 83 aaPredicted RBP3.89□□□□□ -1.79
ZEB1-220ENST00000560909 KIF25-AS1Q9Y6Z4 181 aa3.89□□□□□ -1.79
ZEB1-220ENST00000560909 IGHV3OR16-12A0A075B7B8 117 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 A0A1B0GW15 77 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 H3BVH4 76 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 RS1O15537 224 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 CIDEAO60543 219 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 LINC00315P59091 139 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 UFSP1Q6NVU6 142 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 RASL11AQ6T310 242 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 OR10AG1Q8NH19 301 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 WWC2-AS2Q96NR7 200 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 EDA2RQ9HAV5 297 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 RETNQ9HD89 108 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
ZEB1-220ENST00000560909 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 SNURFLB1AK76 121 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 CRYGDP07320 174 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 HTN1P15515 57 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 NTF3P20783 257 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 S100A4P26447 101 aaKnown RBP3.87□□□□□ -1.79
ZEB1-220ENST00000560909 ELOBQ15370 118 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 ZNF876PQ49A33 203 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 ZFP2Q6ZN57 461 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 Q6ZTI0 123 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 ZFP82Q8N141 532 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 FRZBQ92765 325 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 BTF3L4Q96K17 158 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 ZMAT4Q9H898 229 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 NOP10Q9NPE3 64 aaKnown RBP3.87□□□□□ -1.79
ZEB1-220ENST00000560909 RPS10P5Q9NQ39 176 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 SMCO4Q9NRQ5 59 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 MSRB1Q9NZV6 116 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 PHLDA3Q9Y5J5 127 aa3.87□□□□□ -1.79
ZEB1-220ENST00000560909 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
ZEB1-220ENST00000560909 TRAV4A0A0B4J268 109 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 COLCA2A8K830 154 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 A8MWV9 139 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 SPART-AS1P0CW21 52 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 FAM3BP58499 235 aaPredicted RBP3.86□□□□□ -1.79
ZEB1-220ENST00000560909 RIGQ13278 110 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 C12orf74Q32Q52 190 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 COX19Q49B96 90 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 FAM222AQ5U5X8 452 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 CFAP126Q5VTH2 177 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 KCNIP4Q6PIL6 250 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 TMEM191AQ9H0A3 160 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 CELA1Q9UNI1 258 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 U3KQK5 164 aa3.86□□□□□ -1.79
ZEB1-220ENST00000560909 TRGV1A0A0A0MS02 117 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 A0A0J9YWU9 116 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 RHODO00212 210 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 DEFB4AO15263 64 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 S100A8P05109 93 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 TRGC1P0CF51 173 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 S100PP25815 95 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 HBBP68871 147 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 RNF151Q2KHN1 245 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 SPANXN1Q5VSR9 72 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 TMEM136Q6ZRR5 245 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 CBLN2Q8IUK8 224 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 GNB1LQ9BYB4 327 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 JPT2Q9H910 190 aa3.85□□□□□ -1.79
ZEB1-220ENST00000560909 MRPL16Q9NX20 251 aaKnown RBP3.85□□□□□ -1.79
ZEB1-220ENST00000560909 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 TENM2Q9NT68 2774 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 MUC21A0A0G2JKD1 596 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 MUC21A0A140T8X8 626 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GAGE12BA1L429 117 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 M0R381 172 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 PHOX2AO14813 284 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GAGE7O76087 117 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 IGHV3-53P01767 116 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GAGE12FP0CL80 117 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GAGE12GP0CL81 117 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GAGE12IP0CL82 117 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 GATA1P15976 413 aaPredicted RBP3.84□□□□□ -1.79
ZEB1-220ENST00000560909 RAB4AP20338 218 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 EVI2AP22794 236 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms