RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RNF185Q96GF1 192 aa5.03□□□□□ -1.6
TSPAN3-209ENST00000560715 FAM186AA6NE01 2351 aa5.03□□□□□ -1.6
TSPAN3-209ENST00000560715 OVOL1O14753 267 aa5.03□□□□□ -1.6
TSPAN3-209ENST00000560715 DCHS1Q96JQ0 3298 aa5.03□□□□□ -1.6
TSPAN3-209ENST00000560715 TRGV5A0A0B4J1U4 118 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 INS-IGF2F8WCM5 200 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-13P01766 116 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 COX6B1P14854 86 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 LMO4P61968 165 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 DEFB121Q5J5C9 76 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 C10orf25Q5T742 122 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 C9orf85Q96MD7 179 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 LINC00527Q9UJ94 153 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 KNTC1P50748 2209 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 IGLV2-18A0A075B6J9 118 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-30P01768 117 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-30-5P0DP03 117 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 DEFB127Q9H1M4 99 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 FREM1Q5H8C1 2179 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 TRAV17A0A0B4J275 112 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 GAS8-AS1O95177 125 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 TMEM258P61165 79 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 TMEM170BQ5T4T1 132 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 EXOC3-AS1Q8N2X6 119 aa5.02□□□□□ -1.61
TSPAN3-209ENST00000560715 SPTBN4Q9H254 2564 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 CNTRLQ7Z7A1 2325 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-38A0A0C4DH36 116 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 A0A0J9YY99 117 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 TRACP01848 142 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 SLC25A16P16260 332 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 ERHP84090 104 aaKnown RBP5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 METTL26Q96S19 204 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 DNAJC13O75165 2243 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 PTPRZ1P23471 2315 aaPredicted RBP5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-33P01772 117 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 GPR179Q6PRD1 2367 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 AHCTF1Q8WYP5 2266 aa5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 RIF1Q5UIP0 2472 aaKnown RBP5.01□□□□□ -1.61
TSPAN3-209ENST00000560715 DMXL1Q9Y485 3027 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 GVINP1Q7Z2Y8 2422 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 C8orf87E5RJ46 101 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 CNTFRP26992 372 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 C2orf82Q6UX34 121 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 FDCSPQ8NFU4 85 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 NDUFA4L2Q9NRX3 87 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 TMEM14CQ9P0S9 112 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-64DA0A0J9YX35 117 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 H3BT86 120 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 ACYP1P07311 99 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 JPT2Q9H910 190 aa5□□□□□ -1.61
TSPAN3-209ENST00000560715 MRPL36Q9P0J6 103 aaKnown RBP5□□□□□ -1.61
TSPAN3-209ENST00000560715 ZNF292O60281 2723 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 CACNA1AO00555 2505 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 SH2D1AO60880 128 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 TFF1P04155 84 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 SAA2P0DJI9 122 aaPredicted RBP4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 SLC25A29Q8N8R3 303 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 TMEM263Q8WUH6 116 aaKnown RBP4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 C8orf49Q96NF6 230 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 CTSZQ9UBR2 303 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 hADV29S1A0JD25 119 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 K7ENP7 123 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3-48P01763 117 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 ZNF22P17026 224 aaPredicted RBP4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 HERVK_113P61574 105 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 CNFNQ9BYD5 112 aa4.99□□□□□ -1.61
TSPAN3-209ENST00000560715 H7C423 109 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 NXPH4O95158 308 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 CXCL5P42830 114 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 LINC00643Q86TS7 51 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 KLHL30-AS1Q8NEE0 82 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 RBM12B-AS1Q9P1G2 102 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 OTOGLQ3ZCN5 2332 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 K7EQG2 157 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 TMEM61Q8N0U2 210 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 PYGO1Q9Y3Y4 419 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 TRBV19A0A075B6N1 114 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 TRBV30A0A0K0K1B3 111 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 IGKV1-16P04430 117 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 SAA1P0DJI8 122 aaPredicted RBP4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 ZNF826PQ6ZT77 177 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 LYPD1Q8N2G4 141 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
TSPAN3-209ENST00000560715 ATOX1O00244 68 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV1-2P23083 117 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 HIST1H4AP62805 103 aaKnown RBP4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 WT1-ASQ06250 92 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 DEFB109BQ30KR1 87 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 LINC00242Q5T6M2 205 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 DSCR8Q96T75 97 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3OR16-12A0A075B7B8 117 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 LEAP2Q969E1 77 aa4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms