RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
RPL28-209ENST00000560055 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
RPL28-209ENST00000560055 RHODO00212 210 aa11.62□□□□□ -0.55
RPL28-209ENST00000560055 RHOHQ15669 191 aa11.62□□□□□ -0.55
RPL28-209ENST00000560055 ZNRF2Q8NHG8 242 aa11.62□□□□□ -0.55
RPL28-209ENST00000560055 MUC21A0A0G2JKD1 596 aa11.61□□□□□ -0.55
RPL28-209ENST00000560055 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
RPL28-209ENST00000560055 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
RPL28-209ENST00000560055 A0A087WWL8 130 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 A0A1W2PPQ1 181 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 SRIP30626 198 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 CTRLP40313 264 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
RPL28-209ENST00000560055 MRPS16Q9Y3D3 137 aaKnown RBP11.6□□□□□ -0.55
RPL28-209ENST00000560055 F2Z2F3 143 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 ERVFC1-1P60608 527 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 TMEM241Q24JQ0 296 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 CT83Q5H943 113 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 FAM74A4Q5TZK3 123 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 TPPP3Q9BW30 176 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
RPL28-209ENST00000560055 DNAH17Q9UFH2 4485 aa11.58□□□□□ -0.55
RPL28-209ENST00000560055 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
RPL28-209ENST00000560055 LINC00694P0DN24 101 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 RPL23P62829 140 aaKnown RBP11.58□□□□□ -0.56
RPL28-209ENST00000560055 CACNG7P62955 275 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 C14orf178Q8N769 122 aaPredicted RBP11.58□□□□□ -0.56
RPL28-209ENST00000560055 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 KIF25-AS1Q9Y6Z4 181 aa11.58□□□□□ -0.56
RPL28-209ENST00000560055 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 Q6ZR54 194 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 SH2D6Q7Z4S9 175 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 ISOC2Q96AB3 205 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 MSRB1Q9NZV6 116 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 Q9UF83 564 aa11.57□□□□□ -0.56
RPL28-209ENST00000560055 IGLV2-18A0A075B6J9 118 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 A8MWL6 223 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 LINC00315P59091 139 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 SSTP61278 116 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 AP1S3Q96PC3 154 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
RPL28-209ENST00000560055 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
RPL28-209ENST00000560055 TIRAPP58753 221 aa11.55□□□□□ -0.56
RPL28-209ENST00000560055 RAB4BP61018 213 aa11.55□□□□□ -0.56
RPL28-209ENST00000560055 Q9H8V8 135 aa11.55□□□□□ -0.56
RPL28-209ENST00000560055 NTF3P20783 257 aa11.54□□□□□ -0.56
RPL28-209ENST00000560055 ADIRFQ15847 76 aa11.54□□□□□ -0.56
RPL28-209ENST00000560055 V9GYV3 84 aa11.54□□□□□ -0.56
RPL28-209ENST00000560055 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
RPL28-209ENST00000560055 M0R2N4 97 aa11.53□□□□□ -0.56
RPL28-209ENST00000560055 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
RPL28-209ENST00000560055 GFRA4Q9GZZ7 299 aa11.53□□□□□ -0.56
RPL28-209ENST00000560055 NBDYA0A0U1RRE5 68 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 GAGE12JA6NER3 117 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 SMIM17P0DL12 118 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 EVI2AP22794 236 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 GAGE1Q13065 139 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 GAGE4Q13068 117 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 GAGE5Q13069 117 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 ZNF56Q15929 161 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 GAGE13Q4V321 117 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
RPL28-209ENST00000560055 TRGC1P0CF51 173 aa11.51□□□□□ -0.57
RPL28-209ENST00000560055 OR10G8Q8NGN5 311 aa11.51□□□□□ -0.57
RPL28-209ENST00000560055 ATP6V0E2Q8NHE4 81 aa11.51□□□□□ -0.57
RPL28-209ENST00000560055 HIGD1CA8MV81 97 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 TWIST1Q15672 202 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 UQCC3Q6UW78 93 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 KRTAP1-5Q9BYS1 174 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
RPL28-209ENST00000560055 SIVA1O15304 175 aa11.49□□□□□ -0.57
RPL28-209ENST00000560055 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
RPL28-209ENST00000560055 NEXN-AS1Q8NBZ9 246 aa11.49□□□□□ -0.57
RPL28-209ENST00000560055 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
RPL28-209ENST00000560055 PKHD1P08F94 4074 aa11.49□□□□□ -0.57
RPL28-209ENST00000560055 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 F5H697 171 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 M0QY20 66 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 UBE2D3P61077 147 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 UBE2D2P62837 147 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 LELP1Q5T871 98 aa11.48□□□□□ -0.57
RPL28-209ENST00000560055 MGPP08493 103 aa11.47□□□□□ -0.57
RPL28-209ENST00000560055 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
RPL28-209ENST00000560055 SUMO4Q6EEV6 95 aa11.47□□□□□ -0.57
RPL28-209ENST00000560055 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
RPL28-209ENST00000560055 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
RPL28-209ENST00000560055 A0A1B0GUT8 65 aa11.46□□□□□ -0.57
RPL28-209ENST00000560055 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
RPL28-209ENST00000560055 RTL8CO15255 209 aa11.46□□□□□ -0.57
RPL28-209ENST00000560055 DNAH10OSP0CZ25 163 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms