RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 FAM74A4Q5TZK3 123 aa13.4□□□□□ -0.26
SHF-205ENST00000559566 BIN3Q9NQY0 253 aa13.4□□□□□ -0.26
SHF-205ENST00000559566 ZNF727A8MUV8 499 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 SRIP30626 198 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 RHOHQ15669 191 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 LINC01551Q86U37 167 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 FER1L6-AS1Q8NA97 138 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 UPK3BQ9BT76 320 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
SHF-205ENST00000559566 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
SHF-205ENST00000559566 MSRB1Q9NZV6 116 aa13.38□□□□□ -0.27
SHF-205ENST00000559566 LY96Q9Y6Y9 160 aa13.38□□□□□ -0.27
SHF-205ENST00000559566 DNAH17Q9UFH2 4485 aa13.38□□□□□ -0.27
SHF-205ENST00000559566 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
SHF-205ENST00000559566 SPANXN1Q5VSR9 72 aa13.37□□□□□ -0.27
SHF-205ENST00000559566 PRADC1Q9BSG0 188 aa13.37□□□□□ -0.27
SHF-205ENST00000559566 KRTAP1-5Q9BYS1 174 aa13.37□□□□□ -0.27
SHF-205ENST00000559566 Q9H8V8 135 aa13.37□□□□□ -0.27
SHF-205ENST00000559566 RHODO00212 210 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 PEA15Q15121 130 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 LYZL1Q6UWQ5 148 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 GTSF1Q8WW33 167 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 KIF25-AS1Q9Y6Z4 181 aa13.36□□□□□ -0.27
SHF-205ENST00000559566 NBDYA0A0U1RRE5 68 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 GAGE12JA6NER3 117 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 CTRLP40313 264 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 GAGE1Q13065 139 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 GAGE4Q13068 117 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 GAGE5Q13069 117 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 GAGE13Q4V321 117 aa13.35□□□□□ -0.27
SHF-205ENST00000559566 FAT2Q9NYQ8 4349 aa13.34□□□□□ -0.27
SHF-205ENST00000559566 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
SHF-205ENST00000559566 LINC00315P59091 139 aa13.34□□□□□ -0.27
SHF-205ENST00000559566 XKRY2A2RUG3 117 aa13.33□□□□□ -0.28
SHF-205ENST00000559566 RTL8CO15255 209 aa13.33□□□□□ -0.28
SHF-205ENST00000559566 ERVFC1-1P60608 527 aa13.33□□□□□ -0.28
SHF-205ENST00000559566 RPL23P62829 140 aaKnown RBP13.33□□□□□ -0.28
SHF-205ENST00000559566 CLLU1Q5K131 121 aa13.32□□□□□ -0.28
SHF-205ENST00000559566 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
SHF-205ENST00000559566 ISOC2Q96AB3 205 aa13.32□□□□□ -0.28
SHF-205ENST00000559566 A0A1W2PPQ1 181 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 RAB14P61106 215 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 CACNG7P62955 275 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 TMEM241Q24JQ0 296 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 FAM74A3Q4VXF1 159 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 SMDT1Q9H4I9 107 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 BIRC6Q9NR09 4857 aa13.31□□□□□ -0.28
SHF-205ENST00000559566 F2Z2F3 143 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 NTF3P20783 257 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 ZNF56Q15929 161 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 ATP6V0E2Q8NHE4 81 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 AP1S3Q96PC3 154 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 CNFNQ9BYD5 112 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
SHF-205ENST00000559566 SIVA1O15304 175 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 EVI2AP22794 236 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 TIRAPP58753 221 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 RAB4BP61018 213 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 ADIRFQ15847 76 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 NAT8Q9UHE5 227 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 V9GYV3 84 aa13.29□□□□□ -0.28
SHF-205ENST00000559566 CT83Q5H943 113 aa13.28□□□□□ -0.28
SHF-205ENST00000559566 SOHLH1Q5JUK2 328 aa13.28□□□□□ -0.28
SHF-205ENST00000559566 PGLYRP4Q96LB8 373 aa13.28□□□□□ -0.28
SHF-205ENST00000559566 A8MWL6 223 aa13.27□□□□□ -0.29
SHF-205ENST00000559566 WDR73Q6P4I2 378 aa13.27□□□□□ -0.29
SHF-205ENST00000559566 NEXN-AS1Q8NBZ9 246 aa13.27□□□□□ -0.29
SHF-205ENST00000559566 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.29
SHF-205ENST00000559566 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
SHF-205ENST00000559566 MGPP08493 103 aa13.26□□□□□ -0.29
SHF-205ENST00000559566 FOXA3P55318 350 aaPredicted RBP13.26□□□□□ -0.29
SHF-205ENST00000559566 C1orf134Q5TEV5 83 aa13.26□□□□□ -0.29
SHF-205ENST00000559566 F5H697 171 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 SMIM17P0DL12 118 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 UBE2D3P61077 147 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 UBE2D2P62837 147 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 TWIST1Q15672 202 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 SUMO4Q6EEV6 95 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 OR10G8Q8NGN5 311 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
SHF-205ENST00000559566 LELP1Q5T871 98 aa13.24□□□□□ -0.29
SHF-205ENST00000559566 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
SHF-205ENST00000559566 Q8N3U1 123 aa13.24□□□□□ -0.29
SHF-205ENST00000559566 HECTD4Q9Y4D8 3996 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 TRBV7-3A0A075B6L6 115 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 HIGD1CA8MV81 97 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 M0QY20 66 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 TRGC1P0CF51 173 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
SHF-205ENST00000559566 TTC32Q5I0X7 151 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 C15orf54Q8N8G6 183 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
SHF-205ENST00000559566 TNFRSF18Q9Y5U5 241 aa13.23□□□□□ -0.29
SHF-205ENST00000559566 OR10J3Q5JRS4 329 aa13.22□□□□□ -0.29
SHF-205ENST00000559566 GFRA4Q9GZZ7 299 aa13.22□□□□□ -0.29
SHF-205ENST00000559566 DPH3P1Q9H4G8 78 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms