RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 K7EP13 123 aa7.42□□□□□ -1.22
SPG11-216ENST00000559347 RHODO00212 210 aa7.42□□□□□ -1.22
SPG11-216ENST00000559347 CXCL1P09341 107 aa7.42□□□□□ -1.22
SPG11-216ENST00000559347 PRR27Q6MZM9 219 aa7.42□□□□□ -1.22
SPG11-216ENST00000559347 TRAV9-2A0A087WT02 112 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 C16orf90A8MZG2 172 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 M0R381 172 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 EVI2AP22794 236 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 MEF2BQ02080 365 aaPredicted RBP7.41□□□□□ -1.22
SPG11-216ENST00000559347 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 FAM74A4Q5TZK3 123 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 SPATA12Q7Z6I5 190 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 ZFP82Q8N141 532 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 C14orf178Q8N769 122 aaPredicted RBP7.41□□□□□ -1.22
SPG11-216ENST00000559347 SFRP2Q96HF1 295 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
SPG11-216ENST00000559347 A0A087WWL8 130 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 IGHV3-38A0A0C4DH36 116 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GAGE12JA6NER3 117 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 SNAI2O43623 268 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 IFNA1P01562 189 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 CRYGDP07320 174 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 BCL2P10415 239 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GAGE1Q13065 139 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GAGE4Q13068 117 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GAGE5Q13069 117 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GAGE13Q4V321 117 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 CENPWQ5EE01 88 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 OR10J3Q5JRS4 329 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 LELP1Q5T871 98 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 NFE4Q86UQ8 179 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 MSRB1Q9NZV6 116 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 Q9UF83 564 aa7.4□□□□□ -1.22
SPG11-216ENST00000559347 TRAV8-6A0A0B4J262 113 aa7.39□□□□□ -1.23
SPG11-216ENST00000559347 PDE6DO43924 150 aa7.39□□□□□ -1.23
SPG11-216ENST00000559347 TRBV20OR9-2A0A075B6H5 130 aa7.38□□□□□ -1.23
SPG11-216ENST00000559347 OR5AL1P0C617 328 aa7.38□□□□□ -1.23
SPG11-216ENST00000559347 ERVFC1-1P60608 527 aa7.38□□□□□ -1.23
SPG11-216ENST00000559347 ALKAL2Q6UX46 152 aa7.38□□□□□ -1.23
SPG11-216ENST00000559347 SMIM12Q96EX1 92 aa7.38□□□□□ -1.23
SPG11-216ENST00000559347 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
SPG11-216ENST00000559347 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
SPG11-216ENST00000559347 RAB19A4D1S5 217 aa7.37□□□□□ -1.23
SPG11-216ENST00000559347 C19orf71A6NCJ1 209 aa7.37□□□□□ -1.23
SPG11-216ENST00000559347 GNG4P50150 75 aa7.37□□□□□ -1.23
SPG11-216ENST00000559347 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
SPG11-216ENST00000559347 A0A087WTM6 91 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IBA57-AS1B1ANH7 110 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 CDK2AP2O75956 126 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IGLC6P0CF74 106 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 TAGLN2P37802 199 aaKnown RBP7.36□□□□□ -1.23
SPG11-216ENST00000559347 ZNF56Q15929 161 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 Q8N3U1 123 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 MED9Q9NWA0 146 aa7.36□□□□□ -1.23
SPG11-216ENST00000559347 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 A0A1B0GVG6 124 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 GZMBP10144 247 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 LAGE3Q14657 143 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
SPG11-216ENST00000559347 A0A087WWC5 75 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 EREGO14944 169 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 NKX2-5P52952 324 aaPredicted RBP7.34□□□□□ -1.23
SPG11-216ENST00000559347 RAB4BP61018 213 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 UBE2D3P61077 147 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 UBE2D2P62837 147 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 RPL36AP83881 106 aaKnown RBP7.34□□□□□ -1.23
SPG11-216ENST00000559347 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 OR10G8Q8NGN5 311 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 RPL36ALQ969Q0 106 aaKnown RBP7.34□□□□□ -1.23
SPG11-216ENST00000559347 DAZAP1Q96EP5 407 aaKnown RBP7.34□□□□□ -1.23
SPG11-216ENST00000559347 Q9HAA7 133 aa7.34□□□□□ -1.23
SPG11-216ENST00000559347 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 P01737 135 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 RPS20P60866 119 aaKnown RBP7.33□□□□□ -1.24
SPG11-216ENST00000559347 BLOC1S1P78537 153 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 FER1L6-AS1Q8NA97 138 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 NEXN-AS1Q8NBZ9 246 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
SPG11-216ENST00000559347 RBFOX3A6NFN3 312 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 TMEM250H0YL14 139 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 K7EN84 100 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 PSCAO43653 123 aa7.32□□□□□ -1.24
SPG11-216ENST00000559347 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPG11-216ENST00000559347 SSTP61278 116 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms