RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CXCL1P09341 107 aa3□□□□□ -1.93
SNX1-205ENST00000559339 OR5AL1P0C617 328 aa3□□□□□ -1.93
SNX1-205ENST00000559339 TIRAPP58753 221 aa3□□□□□ -1.93
SNX1-205ENST00000559339 RPL36AP83881 106 aaKnown RBP3□□□□□ -1.93
SNX1-205ENST00000559339 OR10J3Q5JRS4 329 aa3□□□□□ -1.93
SNX1-205ENST00000559339 LELP1Q5T871 98 aa3□□□□□ -1.93
SNX1-205ENST00000559339 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
SNX1-205ENST00000559339 OR2D3Q8NGH3 330 aa3□□□□□ -1.93
SNX1-205ENST00000559339 RPL36ALQ969Q0 106 aaKnown RBP3□□□□□ -1.93
SNX1-205ENST00000559339 SFRP2Q96HF1 295 aa3□□□□□ -1.93
SNX1-205ENST00000559339 DERL1Q9BUN8 251 aa3□□□□□ -1.93
SNX1-205ENST00000559339 EIF5A2Q9GZV4 153 aaKnown RBP3□□□□□ -1.93
SNX1-205ENST00000559339 GTSF1LQ9H1H1 148 aa3□□□□□ -1.93
SNX1-205ENST00000559339 SCRT2Q9NQ03 307 aa3□□□□□ -1.93
SNX1-205ENST00000559339 URGCP-MRPS24S4R325 110 aa3□□□□□ -1.93
SNX1-205ENST00000559339 DYNC2H1Q8NCM8 4307 aaKnown RBP3□□□□□ -1.93
SNX1-205ENST00000559339 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 ALMS1Q8TCU4 4167 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 DNAH1Q9P2D7 4330 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 TRBV7-3A0A075B6L6 115 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 RAB19A4D1S5 217 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 GAGE12JA6NER3 117 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 H7C1H1 209 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 SNAI2O43623 268 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 PSCAO43653 123 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 CRYGDP07320 174 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 NKX2-5P52952 324 aaPredicted RBP2.99□□□□□ -1.93
SNX1-205ENST00000559339 CEBPGP53567 150 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 LINC00315P59091 139 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 RAB4BP61018 213 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 SSTP61278 116 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 CACNG7P62955 275 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 RPL19P84098 196 aaKnown RBP2.99□□□□□ -1.93
SNX1-205ENST00000559339 GAGE1Q13065 139 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 GAGE4Q13068 117 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 GAGE5Q13069 117 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 ZNF56Q15929 161 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 GAGE13Q4V321 117 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 LINC01556Q5JQF7 62 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 UFSP1Q6NVU6 142 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 WFDC10BQ8IUB3 73 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 FER1L6-AS1Q8NA97 138 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 OR10AG1Q8NH19 301 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 LYPD6BQ8NI32 183 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 ANAPC16Q96DE5 110 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 AP1S3Q96PC3 154 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 SAMD10Q9BYL1 202 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 JPT2Q9H910 190 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 MSRB1Q9NZV6 116 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 NACAE9PAV3 2078 aa2.99□□□□□ -1.93
SNX1-205ENST00000559339 RYR2Q92736 4967 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 A0A087WX48 190 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 MUC21A0A0G2JKD1 596 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 MUC21A0A140T8X8 626 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 A0A1B0GVG6 124 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 A0A1B0GVY2 172 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 C16orf90A8MZG2 172 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 TRGC1P0CF51 173 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 ERVFC1-1P60608 527 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 TOR2AQ5JU69 321 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 SMIM15Q7Z3B0 74 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 ZNF575Q86XF7 245 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 C14orf178Q8N769 122 aaPredicted RBP2.98□□□□□ -1.93
SNX1-205ENST00000559339 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 KRTAP1-5Q9BYS1 174 aa2.98□□□□□ -1.93
SNX1-205ENST00000559339 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TRBV20OR9-2A0A075B6H5 130 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TRAV8-3A0A0A6YYJ7 113 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 ZNF727A8MUV8 499 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 NDUFS6O75380 124 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 IGLV2-8P01709 118 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 IGHV3-30P01768 117 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 IGHV3-33P01772 117 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 MGPP08493 103 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 IGHV3-30-3P0DP02 117 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 IGHV3-30-5P0DP03 117 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 GZMBP10144 247 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 NTF3P20783 257 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 PKIAP61925 76 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 LAGE3Q14657 143 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 PEA15Q15121 130 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 PLECQ15149 4684 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 ELOBQ15370 118 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TWIST1Q15672 202 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 FAM74A3Q4VXF1 159 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TMEM97Q5BJF2 176 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 WDR73Q6P4I2 378 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TEX261Q6UWH6 196 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 LYZL1Q6UWQ5 148 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 Q6ZSN1 163 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 DAZ4Q86SG3 579 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 NUDT10Q8NFP7 164 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 OR10G8Q8NGN5 311 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 OCC1Q8TAD7 63 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 NUDT11Q96G61 164 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 FAM210AQ96ND0 272 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 SMIM7Q9BQ49 75 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms