RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 EIF5AL1Q6IS14 154 aaKnown RBP7.57□□□□□ -1.2
CHRNA3-205ENST00000559080 Q6ZSN1 163 aa7.57□□□□□ -1.2
CHRNA3-205ENST00000559080 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
CHRNA3-205ENST00000559080 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 M0R381 172 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 LELP1Q5T871 98 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 FAM74A4Q5TZK3 123 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 ATP6V0E2Q8NHE4 81 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
CHRNA3-205ENST00000559080 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 TEX46H3BTG2 121 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 RAB5CP51148 216 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 GAGE1Q13065 139 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 GAGE4Q13068 117 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 GAGE5Q13069 117 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 LINC01556Q5JQF7 62 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 DMRTA1Q5VZB9 504 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
CHRNA3-205ENST00000559080 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 PSCAO43653 123 aa7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 TCTE3Q8IZS6 198 aa7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 SAMD10Q9BYL1 202 aa7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 JPT2Q9H910 190 aa7.54□□□□□ -1.2
CHRNA3-205ENST00000559080 A0A087WWL8 130 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 IGHV3-30P01768 117 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 IGHV3-33P01772 117 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 CXCL1P09341 107 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 IGHV3-30-3P0DP02 117 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 IGHV3-30-5P0DP03 117 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 GCSHP23434 173 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 C14orf178Q8N769 122 aaPredicted RBP7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
CHRNA3-205ENST00000559080 A0A087WWC5 75 aa7.52□□□□□ -1.21
CHRNA3-205ENST00000559080 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
CHRNA3-205ENST00000559080 RPL35P42766 123 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-205ENST00000559080 RPL19P84098 196 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-205ENST00000559080 Q9HAA7 133 aa7.52□□□□□ -1.21
CHRNA3-205ENST00000559080 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 IFNA1P01562 189 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 C1QBP02746 253 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 SULT1A2P50226 295 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 LAGE3Q14657 143 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 C11orf52Q96A22 123 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
CHRNA3-205ENST00000559080 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 CCL20P78556 96 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 ZNF56Q15929 161 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 CENPWQ5EE01 88 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 SERTAD4-AS1Q5TG53 156 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 AKAP14Q86UN6 197 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 SLC51BQ86UW2 128 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 OR10AG1Q8NH19 301 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 TMEM70Q9BUB7 260 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 DERL1Q9BUN8 251 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
CHRNA3-205ENST00000559080 SNAI2O43623 268 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 PDE6DO43924 150 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 OR5AL1P0C617 328 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 FAM30AQ9NZY2 134 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 Q9UF83 564 aa7.49□□□□□ -1.21
CHRNA3-205ENST00000559080 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 GNG4P50150 75 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 Q6ZNX1 250 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 SMIM12Q96EX1 92 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
CHRNA3-205ENST00000559080 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 TRAV8-3A0A0A6YYJ7 113 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 MUC21A0A0G2JKD1 596 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 MUC21A0A140T8X8 626 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 BCL2P10415 239 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 RPS20P60866 119 aaKnown RBP7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 RAB4BP61018 213 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 Q8N3U1 123 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 TPPP3Q9BW30 176 aa7.47□□□□□ -1.21
CHRNA3-205ENST00000559080 HMCN2Q8NDA2 5059 aa7.46□□□□□ -1.21
CHRNA3-205ENST00000559080 A0A087WX48 190 aa7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 XKRY2A2RUG3 117 aa7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 TAGLN2P37802 199 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 UBE2D3P61077 147 aa7.46□□□□□ -1.22
CHRNA3-205ENST00000559080 SSTP61278 116 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms