RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DAPK1P53355 1430 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 CDK5RAP2Q96SN8 1893 aa0.7□□□□□ -2.3
CASC4-206ENST00000558847 KCNRGQ8N5I3 272 aa0.7□□□□□ -2.3
CASC4-206ENST00000558847 PRR15LQ9BU68 103 aa0.7□□□□□ -2.3
CASC4-206ENST00000558847 BPESC1Q9GZL8 116 aa0.7□□□□□ -2.3
CASC4-206ENST00000558847 SOGA1O94964 1423 aa0.7□□□□□ -2.3
CASC4-206ENST00000558847 ABCA4P78363 2273 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 PLXNA2O75051 1894 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 ZNF142P52746 1687 aaPredicted RBP0.69□□□□□ -2.3
CASC4-206ENST00000558847 CCDC58Q4VC31 144 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 C9orf116Q5BN46 136 aaPredicted RBP0.69□□□□□ -2.3
CASC4-206ENST00000558847 C4orf33Q8N1A6 199 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 COX7B2Q8TF08 81 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 NAV3Q8IVL0 2385 aa0.69□□□□□ -2.3
CASC4-206ENST00000558847 M0R129 80 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 ADGRB1O14514 1584 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 PRH1P02810 166 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 IL5P05113 134 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 ARPC4P59998 168 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 NPC2P61916 151 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 SPTSSAQ969W0 71 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 TMEM242Q9NWH2 141 aa0.68□□□□□ -2.3
CASC4-206ENST00000558847 ASH1LQ9NR48 2969 aaKnown RBP0.68□□□□□ -2.3
CASC4-206ENST00000558847 C20orf197Q8N268 126 aa0.67□□□□□ -2.3
CASC4-206ENST00000558847 COPS9Q8WXC6 57 aa0.67□□□□□ -2.3
CASC4-206ENST00000558847 SMR3AQ99954 134 aa0.67□□□□□ -2.3
CASC4-206ENST00000558847 SCP2D1Q9UJQ7 156 aa0.67□□□□□ -2.3
CASC4-206ENST00000558847 V9GYV3 84 aa0.67□□□□□ -2.3
CASC4-206ENST00000558847 CDK13Q14004 1512 aaKnown RBP0.67□□□□□ -2.3
CASC4-206ENST00000558847 VIRMAQ69YN4 1812 aaKnown RBP0.66□□□□□ -2.3
CASC4-206ENST00000558847 NDUFB6O95139 128 aa0.66□□□□□ -2.3
CASC4-206ENST00000558847 HMGN1P05114 100 aa0.66□□□□□ -2.3
CASC4-206ENST00000558847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.66□□□□□ -2.3
CASC4-206ENST00000558847 VMO1Q7Z5L0 202 aa0.66□□□□□ -2.3
CASC4-206ENST00000558847 KIAA0100Q14667 2235 aaKnown RBP0.65□□□□□ -2.3
CASC4-206ENST00000558847 PIGBOS1A0A0B4J2F0 54 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 PITX3O75364 302 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 SNCGO76070 127 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 CBLN1P23435 193 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 SELENOWP63302 87 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 SMIM11BQ8TCY0 68 aa0.65□□□□□ -2.31
CASC4-206ENST00000558847 TRBV7-1A0A0A6YYK4 115 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 APODP05090 189 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 SPINK6Q6UWN8 80 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 SDF2Q99470 211 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 RBBP6Q7Z6E9 1792 aaKnown RBP0.64□□□□□ -2.31
CASC4-206ENST00000558847 MYH13Q9UKX3 1938 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 KIF13AQ9H1H9 1805 aa0.64□□□□□ -2.31
CASC4-206ENST00000558847 ABCA1O95477 2261 aa0.63□□□□□ -2.31
CASC4-206ENST00000558847 A0A087WTM6 91 aa0.63□□□□□ -2.31
CASC4-206ENST00000558847 FAM92AA1XBS5 289 aa0.63□□□□□ -2.31
CASC4-206ENST00000558847 UBE2G1P62253 170 aa0.63□□□□□ -2.31
CASC4-206ENST00000558847 GRIN2AQ12879 1464 aa0.62□□□□□ -2.31
CASC4-206ENST00000558847 ZNF818PQ6ZRF7 136 aa0.62□□□□□ -2.31
CASC4-206ENST00000558847 DPH3Q96FX2 82 aa0.62□□□□□ -2.31
CASC4-206ENST00000558847 TSC22D3Q99576 134 aa0.62□□□□□ -2.31
CASC4-206ENST00000558847 TANC1Q9C0D5 1861 aa0.62□□□□□ -2.31
CASC4-206ENST00000558847 MAP2P11137 1827 aaKnown RBP0.61□□□□□ -2.31
CASC4-206ENST00000558847 CACNA1EQ15878 2313 aa0.61□□□□□ -2.31
CASC4-206ENST00000558847 GVQW2A0A096LPI5 108 aaPredicted RBP0.61□□□□□ -2.31
CASC4-206ENST00000558847 ARL11Q969Q4 196 aa0.61□□□□□ -2.31
CASC4-206ENST00000558847 MYOM3Q5VTT5 1437 aa0.61□□□□□ -2.31
CASC4-206ENST00000558847 KDM6BO15054 1643 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 UBE2D1P51668 147 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 EDDM3BP56851 147 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 PROK2Q9HC23 129 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 JMJD1CQ15652 2540 aa0.6□□□□□ -2.31
CASC4-206ENST00000558847 TRBV10-3A0A0K0K1G6 114 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 APOC4-APOC2K7ER74 178 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 NDUFA2O43678 99 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 ACYP2P14621 99 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 C10orf82Q8WW14 230 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 C1orf54Q8WWF1 131 aa0.59□□□□□ -2.31
CASC4-206ENST00000558847 LAMB1P07942 1786 aa0.59□□□□□ -2.32
CASC4-206ENST00000558847 ZNF518AQ6AHZ1 1483 aa0.59□□□□□ -2.32
CASC4-206ENST00000558847 LAMC3Q9Y6N6 1575 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 APCP25054 2843 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 SMIM6P0DI80 62 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 CCL8P80075 99 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 Q96NJ1 140 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 PDCD10Q9BUL8 212 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 LINC00470Q9BZP3 86 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 FAM107BQ9H098 131 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 MED13LQ71F56 2210 aa0.58□□□□□ -2.32
CASC4-206ENST00000558847 IBTKQ9P2D0 1353 aaPredicted RBP0.57□□□□□ -2.32
CASC4-206ENST00000558847 TMEM14DPA8MWL7 114 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 FAM25AB3EWG3 89 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 FAM25CB3EWG5 89 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 FAM25GB3EWG6 89 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 C12orf73Q69YU5 71 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 SPTSSBQ8NFR3 76 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 SNRNP25Q9BV90 132 aaKnown RBP0.57□□□□□ -2.32
CASC4-206ENST00000558847 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 MYH6P13533 1939 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
CASC4-206ENST00000558847 BDP1A6H8Y1 2624 aa0.56□□□□□ -2.32
CASC4-206ENST00000558847 IFT140Q96RY7 1462 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms