RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RPL7L1Q6DKI1 246 aaKnown RBP5.43□□□□□ -1.54
TRAF3-205ENST00000558700 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
TRAF3-205ENST00000558700 NKX6-2Q9C056 277 aaPredicted RBP5.43□□□□□ -1.54
TRAF3-205ENST00000558700 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
TRAF3-205ENST00000558700 PEX7O00628 323 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 RNASE3P12724 160 aaKnown RBP5.42□□□□□ -1.54
TRAF3-205ENST00000558700 FUSP35637 526 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRAF3-205ENST00000558700 UBE2G2P60604 165 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 LAGE3Q14657 143 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 DPPA3Q6W0C5 159 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 ZFP2Q6ZN57 461 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 OR2T35Q8NGX2 323 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 ATP6V0E2Q8NHE4 81 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 HIST1H2BAQ96A08 127 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 GTSF1LQ9H1H1 148 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 PARLQ9H300 379 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 Q9HAA7 133 aa5.42□□□□□ -1.54
TRAF3-205ENST00000558700 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 MAP1LC3B2A6NCE7 125 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 FABP5P3A8MUU1 101 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 IBA57-AS1B1ANH7 110 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 UBE2G1P62253 170 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 ZNF726P1Q15940 193 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 LGALSLQ3ZCW2 172 aaPredicted RBP5.41□□□□□ -1.54
TRAF3-205ENST00000558700 Q5BKY6 102 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 FRZBQ92765 325 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 FMC1Q96HJ9 113 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 TCEAL7Q9BRU2 100 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 MAP1LC3BQ9GZQ8 125 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 PAM16Q9Y3D7 125 aa5.41□□□□□ -1.54
TRAF3-205ENST00000558700 GAGE12JA6NER3 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 FAM74A7A6NL05 159 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 B4DEV8 164 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 H3BVH4 76 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-30P01768 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-33P01772 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 LINC00694P0DN24 101 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-30-5P0DP03 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 FGF8P55075 233 aaPredicted RBP5.4□□□□□ -1.54
TRAF3-205ENST00000558700 KRTAP10-1P60331 282 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 GAGE1Q13065 139 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 GAGE4Q13068 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 GAGE5Q13069 117 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 Q5VSD8 79 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 STOML3Q8TAV4 291 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 TMEM70Q9BUB7 260 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 IL36BQ9NZH7 164 aa5.4□□□□□ -1.54
TRAF3-205ENST00000558700 A0A087WWC5 75 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 IGKV3D-20A0A0C4DH25 116 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 A4D1N5 150 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 LRCOL1A6NCL2 159 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 M0R036 132 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 ARPC5O15511 151 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 AKR1C3P42330 323 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 XGP55808 180 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 RGS21Q2M5E4 152 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 DNLZQ5SXM8 178 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 FAM162BQ5T6X4 162 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 COX8CQ7Z4L0 72 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 Q8N814 137 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 OR11H4Q8NGC9 324 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 ZC2HC1AQ96GY0 325 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 LINC00479Q96M42 142 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 ZFP30Q9Y2G7 519 aa5.39□□□□□ -1.55
TRAF3-205ENST00000558700 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 SH2D1AO60880 128 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 ARMS2P0C7Q2 107 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 SEC11BP0C7V7 166 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 TPT1P13693 172 aaKnown RBP5.38□□□□□ -1.55
TRAF3-205ENST00000558700 FHITP49789 147 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
TRAF3-205ENST00000558700 ZNF345Q14585 488 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 FAM74A4Q5TZK3 123 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 URGCP-MRPS24S4R325 110 aa5.38□□□□□ -1.55
TRAF3-205ENST00000558700 TRBV6-1A0A0K0K1D8 114 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 GRIFINA4D1Z8 144 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 KRBOX1C9JBD0 128 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 G3V3Q6 166 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 PFDN1O60925 122 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 LTAP01374 205 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 UFSP1Q6NVU6 142 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 ZFP82Q8N141 532 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 RMI2Q96E14 147 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 JPT2Q9H910 190 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
TRAF3-205ENST00000558700 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 M0R381 172 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 C1QBP02746 253 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 RPL36AP83881 106 aaKnown RBP5.36□□□□□ -1.55
TRAF3-205ENST00000558700 KCNIP4Q6PIL6 250 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 C14orf178Q8N769 122 aaPredicted RBP5.36□□□□□ -1.55
TRAF3-205ENST00000558700 RPL36ALQ969Q0 106 aaKnown RBP5.36□□□□□ -1.55
TRAF3-205ENST00000558700 CHCHD7Q9BUK0 85 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms