RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SAMD10Q9BYL1 202 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 V9GYV3 84 aa12.2□□□□□ -0.46
TPM1-214ENST00000558544 A8MWL6 223 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 NUDT3O95989 172 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 CTRLP40313 264 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 CRYBA4P53673 196 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
TPM1-214ENST00000558544 A0A087WWL8 130 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 F2Z2F3 143 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 PAX4O43316 350 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 MT-ND4LP03901 98 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 SLAQ13239 276 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 VPS13DQ5THJ4 4388 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 CIDEAO60543 219 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 GATA1P15976 413 aaPredicted RBP12.18□□□□□ -0.46
TPM1-214ENST00000558544 CACNG7P62955 275 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 ANAPC16Q96DE5 110 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 YPEL4Q96NS1 127 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 CTDSP1Q9GZU7 261 aa12.18□□□□□ -0.46
TPM1-214ENST00000558544 H3BNG1 76 aa12.17□□□□□ -0.46
TPM1-214ENST00000558544 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
TPM1-214ENST00000558544 ZFP2Q6ZN57 461 aa12.17□□□□□ -0.46
TPM1-214ENST00000558544 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
TPM1-214ENST00000558544 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
TPM1-214ENST00000558544 RHODO00212 210 aa12.16□□□□□ -0.46
TPM1-214ENST00000558544 CRYGDP07320 174 aa12.16□□□□□ -0.46
TPM1-214ENST00000558544 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
TPM1-214ENST00000558544 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
TPM1-214ENST00000558544 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
TPM1-214ENST00000558544 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 NTF3P20783 257 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 Q6ZSN1 163 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 C14orf178Q8N769 122 aaPredicted RBP12.15□□□□□ -0.46
TPM1-214ENST00000558544 SLC25A29Q8N8R3 303 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
TPM1-214ENST00000558544 LINC00476Q8WZB0 136 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
TPM1-214ENST00000558544 A0A096LPF7 62 aa12.14□□□□□ -0.47
TPM1-214ENST00000558544 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
TPM1-214ENST00000558544 GYPEP15421 78 aa12.14□□□□□ -0.47
TPM1-214ENST00000558544 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
TPM1-214ENST00000558544 LCE6AA0A183 80 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 TRBV6-4A0A1B0GX49 114 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 LY6G6CO95867 125 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
TPM1-214ENST00000558544 RHOHQ15669 191 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 TWIST1Q15672 202 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
TPM1-214ENST00000558544 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 COLCA2A8K830 154 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 K7EQD1 137 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 ZNF56Q15929 161 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 PRADC1Q9BSG0 188 aa12.12□□□□□ -0.47
TPM1-214ENST00000558544 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 P0DMU3 169 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 EVI2AP22794 236 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 ELOBQ15370 118 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 RYR2Q92736 4967 aa12.11□□□□□ -0.47
TPM1-214ENST00000558544 MGPP08493 103 aa12.1□□□□□ -0.47
TPM1-214ENST00000558544 SRIP30626 198 aa12.1□□□□□ -0.47
TPM1-214ENST00000558544 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
TPM1-214ENST00000558544 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
TPM1-214ENST00000558544 DNAH6Q9C0G6 4158 aa12.09□□□□□ -0.47
TPM1-214ENST00000558544 TGIF2-C20orf24A0A0A6YYL0 155 aa12.09□□□□□ -0.47
TPM1-214ENST00000558544 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
TPM1-214ENST00000558544 F5H697 171 aa12.09□□□□□ -0.47
TPM1-214ENST00000558544 LINC00315P59091 139 aa12.08□□□□□ -0.48
TPM1-214ENST00000558544 RAB4BP61018 213 aa12.08□□□□□ -0.48
TPM1-214ENST00000558544 IMMP2LQ96T52 175 aa12.08□□□□□ -0.48
TPM1-214ENST00000558544 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
TPM1-214ENST00000558544 Q9UF83 564 aa12.08□□□□□ -0.48
TPM1-214ENST00000558544 RYR3Q15413 4870 aa12.07□□□□□ -0.48
TPM1-214ENST00000558544 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 CCL18P55774 89 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
TPM1-214ENST00000558544 GAGE1Q13065 139 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 GAGE4Q13068 117 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 GAGE5Q13069 117 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 ESRGQ1W209 222 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms