RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RYR2Q92736 4967 aa17.76■□□□□ 0.43
SMAD6-202ENST00000557916 CRYGDP07320 174 aa17.75■□□□□ 0.43
SMAD6-202ENST00000557916 GYPEP15421 78 aa17.75■□□□□ 0.43
SMAD6-202ENST00000557916 CACNG7P62955 275 aa17.75■□□□□ 0.43
SMAD6-202ENST00000557916 UBE2DNLQ8IWF7 75 aa17.75■□□□□ 0.43
SMAD6-202ENST00000557916 SLC25A29Q8N8R3 303 aa17.75■□□□□ 0.43
SMAD6-202ENST00000557916 VPS13DQ5THJ4 4388 aa17.74■□□□□ 0.43
SMAD6-202ENST00000557916 TRBV6-4A0A1B0GX49 114 aa17.74■□□□□ 0.43
SMAD6-202ENST00000557916 UQCC3Q6UW78 93 aa17.74■□□□□ 0.43
SMAD6-202ENST00000557916 Q6ZSN1 163 aa17.74■□□□□ 0.43
SMAD6-202ENST00000557916 GTSF1Q8WW33 167 aa17.74■□□□□ 0.43
SMAD6-202ENST00000557916 CTRLP40313 264 aa17.73■□□□□ 0.43
SMAD6-202ENST00000557916 MRPL23Q16540 153 aaKnown RBP17.73■□□□□ 0.43
SMAD6-202ENST00000557916 RNF212Q495C1 297 aa17.73■□□□□ 0.43
SMAD6-202ENST00000557916 K7EQD1 137 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 CCL18P55774 89 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 RHOHQ15669 191 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 PRADC1Q9BSG0 188 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 RYR3Q15413 4870 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 LOC100131303A0A0U1RQF7 123 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 COMMD7Q86VX2 200 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 C14orf178Q8N769 122 aaPredicted RBP17.72■□□□□ 0.43
SMAD6-202ENST00000557916 OR10G8Q8NGN5 311 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 MSRB1Q9NZV6 116 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 V9GYV3 84 aa17.72■□□□□ 0.43
SMAD6-202ENST00000557916 WDR73Q6P4I2 378 aa17.71■□□□□ 0.43
SMAD6-202ENST00000557916 TSKUQ8WUA8 353 aa17.71■□□□□ 0.43
SMAD6-202ENST00000557916 AP1S3Q96PC3 154 aa17.71■□□□□ 0.43
SMAD6-202ENST00000557916 HYDINQ4G0P3 5121 aa17.7■□□□□ 0.42
SMAD6-202ENST00000557916 NTF3P20783 257 aa17.7■□□□□ 0.42
SMAD6-202ENST00000557916 SRIP30626 198 aa17.7■□□□□ 0.42
SMAD6-202ENST00000557916 LINC00862A6NCI5 91 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 SMIM17P0DL12 118 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 ESRGQ1W209 222 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 NEGR1Q7Z3B1 354 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 PGLYRP4Q96LB8 373 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 CNFNQ9BYD5 112 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 GFRA4Q9GZZ7 299 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 LINC00588Q9Y4M8 146 aa17.69■□□□□ 0.42
SMAD6-202ENST00000557916 FOXA3P55318 350 aaPredicted RBP17.68■□□□□ 0.42
SMAD6-202ENST00000557916 FAM231BA6NCW3 169 aa17.67■□□□□ 0.42
SMAD6-202ENST00000557916 TWIST1Q15672 202 aa17.67■□□□□ 0.42
SMAD6-202ENST00000557916 KIF25-AS1Q9Y6Z4 181 aa17.67■□□□□ 0.42
SMAD6-202ENST00000557916 TMEM218A2RU14 115 aa17.66■□□□□ 0.42
SMAD6-202ENST00000557916 HIGD1CA8MV81 97 aa17.66■□□□□ 0.42
SMAD6-202ENST00000557916 TRGC1P0CF51 173 aa17.66■□□□□ 0.42
SMAD6-202ENST00000557916 ZNF56Q15929 161 aa17.66■□□□□ 0.42
SMAD6-202ENST00000557916 FAM3BP58499 235 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-202ENST00000557916 RAB4BP61018 213 aa17.65■□□□□ 0.42
SMAD6-202ENST00000557916 PNRC1Q12796 327 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-202ENST00000557916 SH2D6Q7Z4S9 175 aa17.64■□□□□ 0.42
SMAD6-202ENST00000557916 F5H697 171 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 F8W036 122 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 EVI2AP22794 236 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 LYPD5Q6UWN5 251 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 BORCS7Q96B45 105 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 Q9UF83 564 aa17.64■□□□□ 0.41
SMAD6-202ENST00000557916 GAGE12JA6NER3 117 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 LINC00315P59091 139 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 GAGE1Q13065 139 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 GAGE4Q13068 117 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 GAGE5Q13069 117 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 GAGE13Q4V321 117 aa17.63■□□□□ 0.41
SMAD6-202ENST00000557916 ADCYAP1P18509 176 aa17.62■□□□□ 0.41
SMAD6-202ENST00000557916 MRPS16Q9Y3D3 137 aaKnown RBP17.62■□□□□ 0.41
SMAD6-202ENST00000557916 KMT2AQ03164 3969 aa17.61■□□□□ 0.41
SMAD6-202ENST00000557916 MGPP08493 103 aa17.61■□□□□ 0.41
SMAD6-202ENST00000557916 DPH3P1Q9H4G8 78 aa17.61■□□□□ 0.41
SMAD6-202ENST00000557916 NAT8BQ9UHF3 227 aa17.61■□□□□ 0.41
SMAD6-202ENST00000557916 A0A1B0GUT8 65 aa17.6■□□□□ 0.41
SMAD6-202ENST00000557916 SMIM27A0A1W2PRY6 76 aa17.6■□□□□ 0.41
SMAD6-202ENST00000557916 NUP35Q8NFH5 326 aa17.6■□□□□ 0.41
SMAD6-202ENST00000557916 ZNRF2Q8NHG8 242 aa17.6■□□□□ 0.41
SMAD6-202ENST00000557916 TRBV10-1A0A0K0K1A3 114 aa17.59■□□□□ 0.41
SMAD6-202ENST00000557916 SMIM15Q7Z3B0 74 aa17.59■□□□□ 0.41
SMAD6-202ENST00000557916 PPP1R2P9O14990 202 aa17.58■□□□□ 0.41
SMAD6-202ENST00000557916 LINC00694P0DN24 101 aa17.58■□□□□ 0.41
SMAD6-202ENST00000557916 ATP6V0E2Q8NHE4 81 aa17.58■□□□□ 0.41
SMAD6-202ENST00000557916 UPK3BQ9BT76 320 aa17.58■□□□□ 0.41
SMAD6-202ENST00000557916 SEC11CQ9BY50 192 aa17.58■□□□□ 0.41
SMAD6-202ENST00000557916 IGLV2-18A0A075B6J9 118 aa17.56■□□□□ 0.4
SMAD6-202ENST00000557916 MT-ND4LP03901 98 aa17.56■□□□□ 0.4
SMAD6-202ENST00000557916 RPL36AP83881 106 aaKnown RBP17.56■□□□□ 0.4
SMAD6-202ENST00000557916 RPL36ALQ969Q0 106 aaKnown RBP17.56■□□□□ 0.4
SMAD6-202ENST00000557916 DNAH6Q9C0G6 4158 aa17.56■□□□□ 0.4
SMAD6-202ENST00000557916 Q9H8V8 135 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 TIRAPP58753 221 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 RIGQ13278 110 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 SUMO4Q6EEV6 95 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 NEXN-AS1Q8NBZ9 246 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 ANAPC16Q96DE5 110 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 GTSF1LQ9H1H1 148 aa17.55■□□□□ 0.4
SMAD6-202ENST00000557916 TRBV7-3A0A075B6L6 115 aa17.54■□□□□ 0.4
SMAD6-202ENST00000557916 H7C1H1 209 aa17.53■□□□□ 0.4
SMAD6-202ENST00000557916 M0QY20 66 aa17.53■□□□□ 0.4
SMAD6-202ENST00000557916 M0R2N4 97 aa17.53■□□□□ 0.4
SMAD6-202ENST00000557916 UBE2D3P61077 147 aa17.51■□□□□ 0.39
SMAD6-202ENST00000557916 UBE2D2P62837 147 aa17.51■□□□□ 0.39
SMAD6-202ENST00000557916 C10orf91Q5T1B1 145 aa17.5■□□□□ 0.39
SMAD6-202ENST00000557916 TMEM191AQ9H0A3 160 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms