RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RHODO00212 210 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 SIX6O95475 246 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 CRPP02741 224 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 S100A4P26447 101 aaKnown RBP7.85□□□□□ -1.15
PSEN1-221ENST00000557293 PRNTQ86SH4 94 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 CLRN3Q8NCR9 226 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 OR10G8Q8NGN5 311 aa7.85□□□□□ -1.15
PSEN1-221ENST00000557293 TRBV10-1A0A0K0K1A3 114 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
PSEN1-221ENST00000557293 LYRM1O43325 122 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 CRIP1P50238 77 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
PSEN1-221ENST00000557293 RPL36AP83881 106 aaKnown RBP7.84□□□□□ -1.15
PSEN1-221ENST00000557293 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
PSEN1-221ENST00000557293 FAM74A4Q5TZK3 123 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 RPL36ALQ969Q0 106 aaKnown RBP7.84□□□□□ -1.15
PSEN1-221ENST00000557293 NUDT15Q9NV35 164 aa7.84□□□□□ -1.15
PSEN1-221ENST00000557293 IGHV3-64A0A075B6Q5 118 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 H3BVH4 76 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 RAB2AP61019 212 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 RBM38Q9H0Z9 239 aaKnown RBP7.83□□□□□ -1.16
PSEN1-221ENST00000557293 WFDC1Q9HC57 220 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
PSEN1-221ENST00000557293 MUC21A0A0G2JKD1 596 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 KRBOX1C9JBD0 128 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 H2AFB2P0C5Z0 115 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 RBX1P62877 108 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 SUMO1P63165 101 aaKnown RBP7.82□□□□□ -1.16
PSEN1-221ENST00000557293 SAPCD1Q5SSQ6 148 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 LINC00269Q8N2A0 174 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 NEXN-AS1Q8NBZ9 246 aa7.82□□□□□ -1.16
PSEN1-221ENST00000557293 TRAV34A0A0B4J273 112 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 A0A1W2PPV4 95 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 GRIFINA4D1Z8 144 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 PTTG1O95997 202 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 LRRC37A5PQ49AS3 106 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 PRR27Q6MZM9 219 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 HSPB11Q9Y547 144 aa7.81□□□□□ -1.16
PSEN1-221ENST00000557293 hDV102S1A0JD36 115 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 B4DEV8 164 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 K7EQM0 130 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 STAG3L2P0CL84 134 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 STAG3L3P0CL85 134 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 OR11H4Q8NGC9 324 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 SCGB1C1Q8TD33 95 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
PSEN1-221ENST00000557293 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
PSEN1-221ENST00000557293 GCHFRP30047 84 aa7.79□□□□□ -1.16
PSEN1-221ENST00000557293 PRSS3P2Q8NHM4 247 aa7.79□□□□□ -1.16
PSEN1-221ENST00000557293 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
PSEN1-221ENST00000557293 M0R036 132 aa7.78□□□□□ -1.16
PSEN1-221ENST00000557293 M0R381 172 aa7.78□□□□□ -1.16
PSEN1-221ENST00000557293 COX6A2Q02221 97 aa7.78□□□□□ -1.16
PSEN1-221ENST00000557293 GAGE6Q13070 117 aa7.78□□□□□ -1.16
PSEN1-221ENST00000557293 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-221ENST00000557293 RAB4BP61018 213 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 REG3AQ06141 175 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 REG3GQ6UW15 175 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 C20orf203Q8NBC4 194 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 GFRA4Q9GZZ7 299 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 VAX2Q9UIW0 290 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 PHLDA3Q9Y5J5 127 aa7.77□□□□□ -1.17
PSEN1-221ENST00000557293 CCDC160A6NGH7 325 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 SH2D1AO60880 128 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 PKIAP61925 76 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-221ENST00000557293 LYPD6BQ8NI32 183 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
PSEN1-221ENST00000557293 MUC2Q02817 5179 aa7.75□□□□□ -1.17
PSEN1-221ENST00000557293 TPT1P13693 172 aaKnown RBP7.75□□□□□ -1.17
PSEN1-221ENST00000557293 RPL12P30050 165 aaKnown RBP7.75□□□□□ -1.17
PSEN1-221ENST00000557293 CDC34P49427 236 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-221ENST00000557293 H2BFSP57053 126 aa7.75□□□□□ -1.17
PSEN1-221ENST00000557293 STPG4Q8N801 248 aa7.75□□□□□ -1.17
PSEN1-221ENST00000557293 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
PSEN1-221ENST00000557293 PPP1R1CQ8WVI7 109 aa7.75□□□□□ -1.17
PSEN1-221ENST00000557293 IGLV4-60A0A075B6I1 120 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 TRBV6-1A0A0K0K1D8 114 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 MPC2O95563 127 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 P01737 135 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 RAB5CP51148 216 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 CYCSP99999 105 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms