RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 A0A087WWC5 75 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 IGHV4-28A0A0C4DH34 117 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 A0A1W2PPQ1 181 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 SMIM27A0A1W2PRY6 76 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 HIGD1CA8MV81 97 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-244ENST00000556898 PPP1R2P9O14990 202 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 S100A4P26447 101 aaKnown RBP3.78□□□□□ -1.8
ATXN3-244ENST00000556898 ASIPP42127 132 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 RPS20P60866 119 aaKnown RBP3.78□□□□□ -1.8
ATXN3-244ENST00000556898 ELOBQ15370 118 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 RRN3P1Q2M238 152 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 TDRG1Q3Y452 100 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 FER1L6-AS1Q8NA97 138 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 RNASE8Q8TDE3 154 aaKnown RBP3.78□□□□□ -1.8
ATXN3-244ENST00000556898 KCNS1Q96KK3 526 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 C9orf85Q96MD7 179 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 YPEL4Q96NS1 127 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 C20orf144Q9BQM9 153 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 CTDSP1Q9GZU7 261 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 MRPL16Q9NX20 251 aaKnown RBP3.78□□□□□ -1.8
ATXN3-244ENST00000556898 CELA1Q9UNI1 258 aa3.78□□□□□ -1.8
ATXN3-244ENST00000556898 A8MWL6 223 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 M0R381 172 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 UBE2CO00762 179 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 SNAI2O43623 268 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 CTRLP40313 264 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 CAMPP49913 170 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 TIRAPP58753 221 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 ZNF415Q09FC8 603 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 DNLZQ5SXM8 178 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 Q6ZTI0 123 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 Q6ZWC4 215 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 TMEM256Q8N2U0 113 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-244ENST00000556898 Q8NAQ8 132 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 IMMP2LQ96T52 175 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 TM2D3Q9BRN9 247 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 SAMD10Q9BYL1 202 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 NOP10Q9NPE3 64 aaKnown RBP3.77□□□□□ -1.81
ATXN3-244ENST00000556898 SCRT2Q9NQ03 307 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 SMCO4Q9NRQ5 59 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 NAT8BQ9UHF3 227 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 HERC2O95714 4834 aa3.77□□□□□ -1.81
ATXN3-244ENST00000556898 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 IGHV3-73A0A0B4J1V6 119 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 A0A0J9YWU9 116 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 COLCA2A8K830 154 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GAGE7O76087 117 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GAS8-AS1O95177 125 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GAGE12FP0CL80 117 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GAGE12GP0CL81 117 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GAGE12IP0CL82 117 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 NTF3P20783 257 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 TWIST1Q15672 202 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 FAM222AQ5U5X8 452 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 POM121L12Q8N7R1 296 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 TMEM263Q8WUH6 116 aaKnown RBP3.76□□□□□ -1.81
ATXN3-244ENST00000556898 C16orf74Q96GX8 76 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 GFRA4Q9GZZ7 299 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 TMEM242Q9NWH2 141 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 PHLDA3Q9Y5J5 127 aa3.76□□□□□ -1.81
ATXN3-244ENST00000556898 XKRY2A2RUG3 117 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 SMIM9A6NGZ8 99 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 SNURFLB1AK76 121 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 NPSP0C0P6 89 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 OR5AL1P0C617 328 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 MIFP14174 115 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 EVI2AP22794 236 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 S100PP25815 95 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 SPANXN1Q5VSR9 72 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 KCNIP4Q6PIL6 250 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 C14orf178Q8N769 122 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-244ENST00000556898 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 BTF3L4Q96K17 158 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 FAM210BQ96KR6 192 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 TP53TG1Q9Y2A0 90 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 KIF25-AS1Q9Y6Z4 181 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
ATXN3-244ENST00000556898 IGHV4-4A0A075B6R2 117 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 A0A1B0GUT8 65 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 CXorf65A6NEN9 183 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 M0R2P5 195 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 RS1O15537 224 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 NXPH4O95158 308 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 CRYGDP07320 174 aa3.74□□□□□ -1.81
ATXN3-244ENST00000556898 MGPP08493 103 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms