RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 AKR1C8PQ5T2L2 129 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 CFAP126Q5VTH2 177 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 DPPA3Q6W0C5 159 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 PTH2Q96A98 100 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 TXNDC17Q9BRA2 123 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 CYTL1Q9NRR1 136 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 LY96Q9Y6Y9 160 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 ARL2-SNX15V9GYD0 113 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
PRPF39-211ENST00000556782 TRAV9-2A0A087WT02 112 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 TRAV34A0A0B4J273 112 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 TRBV6-4A0A1B0GX49 114 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 MAP1LC3B2A6NCE7 125 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 PGPEP1LA6NFU8 196 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 FAM74A7A6NL05 159 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 SMLR1H3BR10 107 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 K7EP13 123 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 CIDEAO60543 219 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 IFNA7P01567 189 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
PRPF39-211ENST00000556782 EVI2AP22794 236 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 PPT1P50897 306 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 FGF8P55075 233 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-211ENST00000556782 ERVFC1-1P60608 527 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 RHOHQ15669 191 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 ZNF506Q5JVG8 444 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 SH2D6Q7Z4S9 175 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 Q86TA4 180 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 SLC25A29Q8N8R3 303 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 HIST1H2BAQ96A08 127 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 NKX6-2Q9C056 277 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-211ENST00000556782 MAP1LC3BQ9GZQ8 125 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 MSRB1Q9NZV6 116 aa3.63□□□□□ -1.83
PRPF39-211ENST00000556782 IGHV3-73A0A0B4J1V6 119 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 IGKV3D-20A0A0C4DH25 116 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 FABP5P3A8MUU1 101 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 GAS8-AS1O95177 125 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 CRYGDP07320 174 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 MGST1P10620 155 aaKnown RBP3.62□□□□□ -1.83
PRPF39-211ENST00000556782 ASIPP42127 132 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 ZNF345Q14585 488 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 PIK3CD-AS1Q5SR53 167 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 COX8CQ7Z4L0 72 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 C10orf126Q8N4M7 172 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 KCNRGQ8N5I3 272 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 MAPKAPK5-AS1Q8N8E1 139 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 ZC2HC1AQ96GY0 325 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 PRADC1Q9BSG0 188 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 PARLQ9H300 379 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 MUC4Q99102 2169 aa3.62□□□□□ -1.83
PRPF39-211ENST00000556782 A0A087WTM6 91 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 TRBV6-1A0A0K0K1D8 114 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 A8MWV9 139 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 B4DEV8 164 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 KRBOX1C9JBD0 128 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 H3BVH4 76 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 SH2D1AO60880 128 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 LTAP01374 205 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 S100A4P26447 101 aaKnown RBP3.61□□□□□ -1.83
PRPF39-211ENST00000556782 FHITP49789 147 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 CRIP1P50238 77 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 UBE2G1P62253 170 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 LINC01556Q5JQF7 62 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 DNLZQ5SXM8 178 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 ZFP2Q6ZN57 461 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 STOML3Q8TAV4 291 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 FMC1Q96HJ9 113 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 TCEAL7Q9BRU2 100 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 IL36BQ9NZH7 164 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 ZFP30Q9Y2G7 519 aa3.61□□□□□ -1.83
PRPF39-211ENST00000556782 TRAV8-6A0A0B4J262 113 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 GRIFINA4D1Z8 144 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 HMSDA8MTL9 139 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 IBA57-AS1B1ANH7 110 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 UMAD1C9J7I0 102 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 M0R036 132 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 BCL2L11O43521 198 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 ARMS2P0C7Q2 107 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 SEC11BP0C7V7 166 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 FUSP35637 526 aaKnown RBP eCLIP3.6□□□□□ -1.83
PRPF39-211ENST00000556782 AKR1C3P42330 323 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 ZNF674Q2M3X9 581 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 LGALSLQ3ZCW2 172 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-211ENST00000556782 OR10J3Q5JRS4 329 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 FAM162BQ5T6X4 162 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 LELP1Q5T871 98 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 CST9LP1Q5W188 147 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 UFSP1Q6NVU6 142 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 OR11H4Q8NGC9 324 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 ATP6V0E2Q8NHE4 81 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 FAM213BQ8TBF2 198 aa3.6□□□□□ -1.83
PRPF39-211ENST00000556782 MBD3L1Q8WWY6 194 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms