RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 MUC21A0A0G2JKD1 596 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 MUC21A0A140T8X8 626 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 GZMBP10144 247 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 TNP2Q05952 138 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 WFDC10BQ8IUB3 73 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 ZFP82Q8N141 532 aa7.29□□□□□ -1.24
GABRB3-211ENST00000556636 TMEM250H0YL14 139 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 K7EN84 100 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 DNAH10OSP0CZ25 163 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 SOHLH1Q5JUK2 328 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 OR2D3Q8NGH3 330 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 NUDT11Q96G61 164 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 TNFRSF18Q9Y5U5 241 aa7.28□□□□□ -1.24
GABRB3-211ENST00000556636 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 RHODO00212 210 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 NDUFS6O75380 124 aaKnown RBP7.27□□□□□ -1.25
GABRB3-211ENST00000556636 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
GABRB3-211ENST00000556636 LINC00315P59091 139 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 GAGE1Q13065 139 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 GAGE4Q13068 117 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 GAGE5Q13069 117 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 FAM74A4Q5TZK3 123 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 TEX261Q6UWH6 196 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 Q6ZRN7 208 aaPredicted RBP7.27□□□□□ -1.25
GABRB3-211ENST00000556636 ATP6V0E2Q8NHE4 81 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 DAZAP1Q96EP5 407 aaKnown RBP7.27□□□□□ -1.25
GABRB3-211ENST00000556636 FAM210AQ96ND0 272 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 KIF25-AS1Q9Y6Z4 181 aa7.27□□□□□ -1.25
GABRB3-211ENST00000556636 P01737 135 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 SRP19P09132 144 aaKnown RBP7.26□□□□□ -1.25
GABRB3-211ENST00000556636 RPS20P60866 119 aaKnown RBP7.26□□□□□ -1.25
GABRB3-211ENST00000556636 SSTP61278 116 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 TOR2AQ5JU69 321 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
GABRB3-211ENST00000556636 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
GABRB3-211ENST00000556636 LELP1Q5T871 98 aa7.25□□□□□ -1.25
GABRB3-211ENST00000556636 SPANXN1Q5VSR9 72 aa7.25□□□□□ -1.25
GABRB3-211ENST00000556636 FER1L6-AS1Q8NA97 138 aa7.25□□□□□ -1.25
GABRB3-211ENST00000556636 EIF5A2Q9GZV4 153 aaKnown RBP7.25□□□□□ -1.25
GABRB3-211ENST00000556636 RNASE7Q9H1E1 156 aaKnown RBP7.25□□□□□ -1.25
GABRB3-211ENST00000556636 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
GABRB3-211ENST00000556636 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 TRBV10-1A0A0K0K1A3 114 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 C9JQL5 133 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 K7EP13 123 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 RAB4BP61018 213 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 LYZL1Q6UWQ5 148 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 HERC2O95714 4834 aa7.24□□□□□ -1.25
GABRB3-211ENST00000556636 TRAV9-2A0A087WT02 112 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 F2Z2F3 143 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 EVI2AP22794 236 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 UBE2D3P61077 147 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 UBE2D2P62837 147 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
GABRB3-211ENST00000556636 LINC01556Q5JQF7 62 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 WDR73Q6P4I2 378 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 FAM231DQ6ZW35 169 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 NEXN-AS1Q8NBZ9 246 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 GTSF1Q8WW33 167 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
GABRB3-211ENST00000556636 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
GABRB3-211ENST00000556636 TRBV7-3A0A075B6L6 115 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 TRAV8-6A0A0B4J262 113 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 NTF3P20783 257 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 CTRLP40313 264 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 CEBPGP53567 150 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 CACNG7P62955 275 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 OR10J3Q5JRS4 329 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 LINC01551Q86U37 167 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 Q8N3U1 123 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 TPPP3Q9BW30 176 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 CNFNQ9BYD5 112 aa7.22□□□□□ -1.25
GABRB3-211ENST00000556636 IBA57-AS1B1ANH7 110 aa7.21□□□□□ -1.26
GABRB3-211ENST00000556636 M0QY20 66 aa7.21□□□□□ -1.26
GABRB3-211ENST00000556636 FOXA3P55318 350 aaPredicted RBP7.21□□□□□ -1.26
GABRB3-211ENST00000556636 RPL36AP83881 106 aaKnown RBP7.21□□□□□ -1.26
GABRB3-211ENST00000556636 RPL36ALQ969Q0 106 aaKnown RBP7.21□□□□□ -1.26
GABRB3-211ENST00000556636 AP1S3Q96PC3 154 aa7.21□□□□□ -1.26
GABRB3-211ENST00000556636 SMIM7Q9BQ49 75 aa7.21□□□□□ -1.26
GABRB3-211ENST00000556636 A0A087WWC5 75 aa7.2□□□□□ -1.26
GABRB3-211ENST00000556636 ZNF727A8MUV8 499 aa7.2□□□□□ -1.26
GABRB3-211ENST00000556636 F5H697 171 aa7.2□□□□□ -1.26
GABRB3-211ENST00000556636 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
GABRB3-211ENST00000556636 ZNF56Q15929 161 aa7.2□□□□□ -1.26
GABRB3-211ENST00000556636 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
GABRB3-211ENST00000556636 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
GABRB3-211ENST00000556636 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
GABRB3-211ENST00000556636 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
GABRB3-211ENST00000556636 IGHV3-30-3P0DP02 117 aa7.19□□□□□ -1.26
GABRB3-211ENST00000556636 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms