RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 CYCSP99999 105 aaKnown RBP6.95□□□□□ -1.3
SYNE2-221ENST00000556342 SMUG1Q53HV7 270 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 UFSP1Q6NVU6 142 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 ATRAIDQ6UW56 229 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-221ENST00000556342 C5orf17Q8NAS9 161 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 PPP1R1CQ8WVI7 109 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 CCDC32Q9BV29 185 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 SMIM3Q9BZL3 60 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 PSG8Q9UQ74 426 aa6.95□□□□□ -1.3
SYNE2-221ENST00000556342 K7EQM0 130 aa6.94□□□□□ -1.3
SYNE2-221ENST00000556342 HMGB3O15347 200 aaKnown RBP6.94□□□□□ -1.3
SYNE2-221ENST00000556342 FLI1Q01543 452 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-221ENST00000556342 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-221ENST00000556342 ZFP69Q49AA0 526 aa6.94□□□□□ -1.3
SYNE2-221ENST00000556342 Q6ZNX1 250 aa6.94□□□□□ -1.3
SYNE2-221ENST00000556342 JPT2Q9H910 190 aa6.94□□□□□ -1.3
SYNE2-221ENST00000556342 IGKV3D-20A0A0C4DH25 116 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 ARL14EPLP0DKL9 152 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
SYNE2-221ENST00000556342 H2BFSP57053 126 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 ELOBQ15370 118 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 MZT2BQ6NZ67 158 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 PRNTQ86SH4 94 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 OR10G9Q8NGN4 311 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
SYNE2-221ENST00000556342 CHCHD7Q9BUK0 85 aa6.93□□□□□ -1.3
SYNE2-221ENST00000556342 A0A087WX48 190 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 RHODO00212 210 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 MPC2O95563 127 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 PET100P0DJ07 73 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 RPL12P30050 165 aaKnown RBP6.92□□□□□ -1.3
SYNE2-221ENST00000556342 ASIPP42127 132 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 OR10G7Q8NGN6 311 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 WFDC1Q9HC57 220 aa6.92□□□□□ -1.3
SYNE2-221ENST00000556342 STAG3L2P0CL84 134 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 STAG3L3P0CL85 134 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 GCHFRP30047 84 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 CDC34P49427 236 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-221ENST00000556342 Q0VG73 95 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 SAPCD1Q5SSQ6 148 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 KCNIP4Q6PIL6 250 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 OR2G3Q8NGZ4 309 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 IL36BQ9NZH7 164 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 LRP2P98164 4655 aa6.91□□□□□ -1.3
SYNE2-221ENST00000556342 RNF213Q63HN8 5207 aa6.9□□□□□ -1.3
SYNE2-221ENST00000556342 FAM74A4Q5TZK3 123 aa6.9□□□□□ -1.3
SYNE2-221ENST00000556342 ENKURQ8TC29 256 aa6.9□□□□□ -1.3
SYNE2-221ENST00000556342 EPDR1Q9UM22 224 aa6.9□□□□□ -1.3
SYNE2-221ENST00000556342 FABP5P3A8MUU1 101 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 USP17L23D6RBM5 183 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 H3BVH4 76 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 IFITM3Q01628 133 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 ENHOQ6UWT2 76 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 RAB24Q969Q5 203 aa6.89□□□□□ -1.31
SYNE2-221ENST00000556342 A0A087WWL8 130 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 B4DEV8 164 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 CRPP02741 224 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 UBE2D3P61077 147 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 UBE2D2P62837 147 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
SYNE2-221ENST00000556342 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 C15orf54Q8N8G6 183 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 S100ZQ8WXG8 99 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
SYNE2-221ENST00000556342 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
SYNE2-221ENST00000556342 TMEM262E9PQX1 116 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 INMT-MINDY4F8WBC2 141 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 CXorf1O96002 111 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 HLA-DQA1P01909 254 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 PRSS1P07477 247 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 Q6ZRU5 148 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 HSD17B11Q8NBQ5 300 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 TNXBP22105 4242 aa6.87□□□□□ -1.31
SYNE2-221ENST00000556342 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 GRIFINA4D1Z8 144 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 PANO1I0J062 215 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 M0R036 132 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 SSNA1O43805 119 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 ANGP03950 147 aaKnown RBP6.86□□□□□ -1.31
SYNE2-221ENST00000556342 CRIP1P50238 77 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 Q86TA4 180 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 ZC2HC1AQ96GY0 325 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms