RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 PSCAO43653 123 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 TOR2AQ5JU69 321 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
SNX6-207ENST00000556303 NTN5Q8WTR8 489 aaPredicted RBP8.47□□□□□ -1.05
SNX6-207ENST00000556303 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
SNX6-207ENST00000556303 TRAV1-1A0A0B4J248 108 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 GAGE12JA6NER3 117 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 GAGE1Q13065 139 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 GAGE4Q13068 117 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 GAGE5Q13069 117 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 TMUB2Q71RG4 321 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 SAMD10Q9BYL1 202 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 JPT2Q9H910 190 aa8.46□□□□□ -1.06
SNX6-207ENST00000556303 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 GRIFINA4D1Z8 144 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 TEX46H3BTG2 121 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 MANBALQ9NQG1 85 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
SNX6-207ENST00000556303 SCO2A0A1W2PP80 73 aa8.44□□□□□ -1.06
SNX6-207ENST00000556303 M0R381 172 aa8.44□□□□□ -1.06
SNX6-207ENST00000556303 FAM74A4Q5TZK3 123 aa8.44□□□□□ -1.06
SNX6-207ENST00000556303 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
SNX6-207ENST00000556303 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
SNX6-207ENST00000556303 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
SNX6-207ENST00000556303 TMSB15BA0A087X1C1 80 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 SNAI2O43623 268 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 OR5AL1P0C617 328 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 GCSHP23434 173 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
SNX6-207ENST00000556303 RAB4BP61018 213 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
SNX6-207ENST00000556303 OR10G8Q8NGN5 311 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
SNX6-207ENST00000556303 C11orf52Q96A22 123 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 SMIM12Q96EX1 92 aa8.43□□□□□ -1.06
SNX6-207ENST00000556303 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 A0A087WWL8 130 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 A0A1B0GV50 99 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 Q8N814 137 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 URGCP-MRPS24S4R325 110 aa8.42□□□□□ -1.06
SNX6-207ENST00000556303 IGLV5-52A0A0A0MRZ9 124 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
SNX6-207ENST00000556303 SULT1A2P50226 295 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 XGP55808 180 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 ELOBQ15370 118 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 RMI2Q96E14 147 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 Q9HAA7 133 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 Q9UF83 564 aa8.41□□□□□ -1.06
SNX6-207ENST00000556303 PDE6DO43924 150 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 C1QBP02746 253 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 KRTAP10-1P60331 282 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 UBE2D3P61077 147 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 UBE2D2P62837 147 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 SPANXN1Q5VSR9 72 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 NIT1Q86X76 327 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.4□□□□□ -1.06
SNX6-207ENST00000556303 GNG13Q9P2W3 67 aa8.4□□□□□ -1.06
SNX6-207ENST00000556303 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 IFNA1P01562 189 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 TAGLN2P37802 199 aaKnown RBP8.39□□□□□ -1.07
SNX6-207ENST00000556303 RPS20P60866 119 aaKnown RBP8.39□□□□□ -1.07
SNX6-207ENST00000556303 PKIAP61925 76 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 CCL20P78556 96 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 TMEM97Q5BJF2 176 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
SNX6-207ENST00000556303 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 BIN3Q9NQY0 253 aa8.39□□□□□ -1.07
SNX6-207ENST00000556303 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
SNX6-207ENST00000556303 A0A087WX48 190 aa8.38□□□□□ -1.07
SNX6-207ENST00000556303 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNX6-207ENST00000556303 RPL19P84098 196 aaKnown RBP8.38□□□□□ -1.07
SNX6-207ENST00000556303 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
SNX6-207ENST00000556303 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
SNX6-207ENST00000556303 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
SNX6-207ENST00000556303 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
SNX6-207ENST00000556303 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
SNX6-207ENST00000556303 Q0VG73 95 aa8.37□□□□□ -1.07
SNX6-207ENST00000556303 ZNF56Q15929 161 aa8.37□□□□□ -1.07
SNX6-207ENST00000556303 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
SNX6-207ENST00000556303 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 RBFOX3A6NFN3 312 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 CACNG7P62955 275 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms