RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
NEDD1-208ENST00000555806 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
NEDD1-208ENST00000555806 TEX46H3BTG2 121 aa12.42□□□□□ -0.42
NEDD1-208ENST00000555806 CCL20P78556 96 aa12.42□□□□□ -0.42
NEDD1-208ENST00000555806 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
NEDD1-208ENST00000555806 PRR27Q6MZM9 219 aa12.42□□□□□ -0.42
NEDD1-208ENST00000555806 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
NEDD1-208ENST00000555806 A0A087WTM6 91 aa12.41□□□□□ -0.42
NEDD1-208ENST00000555806 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
NEDD1-208ENST00000555806 MLST8Q9BVC4 326 aa12.41□□□□□ -0.42
NEDD1-208ENST00000555806 DNAH5Q8TE73 4624 aa12.41□□□□□ -0.42
NEDD1-208ENST00000555806 HSPG2P98160 4391 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 PSCAO43653 123 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 FUSP35637 526 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEDD1-208ENST00000555806 RPL35P42766 123 aaKnown RBP12.4□□□□□ -0.42
NEDD1-208ENST00000555806 SULT1A2P50226 295 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 Q9HAA7 133 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 Q9UF83 564 aa12.4□□□□□ -0.42
NEDD1-208ENST00000555806 TRAV1-1A0A0B4J248 108 aa12.39□□□□□ -0.43
NEDD1-208ENST00000555806 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
NEDD1-208ENST00000555806 DERL1Q9BUN8 251 aa12.39□□□□□ -0.43
NEDD1-208ENST00000555806 C1QBP02746 253 aa12.38□□□□□ -0.43
NEDD1-208ENST00000555806 CXCL1P09341 107 aa12.38□□□□□ -0.43
NEDD1-208ENST00000555806 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
NEDD1-208ENST00000555806 C11orf52Q96A22 123 aa12.38□□□□□ -0.43
NEDD1-208ENST00000555806 CDPF1Q6NVV7 123 aa12.37□□□□□ -0.43
NEDD1-208ENST00000555806 Q6ZNX1 250 aa12.37□□□□□ -0.43
NEDD1-208ENST00000555806 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
NEDD1-208ENST00000555806 OR10AG1Q8NH19 301 aa12.37□□□□□ -0.43
NEDD1-208ENST00000555806 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
NEDD1-208ENST00000555806 A0A087WWC5 75 aa12.36□□□□□ -0.43
NEDD1-208ENST00000555806 IFNA1P01562 189 aa12.36□□□□□ -0.43
NEDD1-208ENST00000555806 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
NEDD1-208ENST00000555806 Q8N3U1 123 aa12.36□□□□□ -0.43
NEDD1-208ENST00000555806 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
NEDD1-208ENST00000555806 hCG_2014768A0A024R1R8 64 aa12.35□□□□□ -0.43
NEDD1-208ENST00000555806 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
NEDD1-208ENST00000555806 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
NEDD1-208ENST00000555806 ZNF56Q15929 161 aa12.35□□□□□ -0.43
NEDD1-208ENST00000555806 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
NEDD1-208ENST00000555806 SNAI2O43623 268 aa12.34□□□□□ -0.43
NEDD1-208ENST00000555806 SSTP61278 116 aa12.34□□□□□ -0.43
NEDD1-208ENST00000555806 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
NEDD1-208ENST00000555806 MEF2BQ02080 365 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-208ENST00000555806 LAGE3Q14657 143 aa12.34□□□□□ -0.43
NEDD1-208ENST00000555806 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
NEDD1-208ENST00000555806 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
NEDD1-208ENST00000555806 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
NEDD1-208ENST00000555806 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.44
NEDD1-208ENST00000555806 PDE6DO43924 150 aa12.33□□□□□ -0.44
NEDD1-208ENST00000555806 OR5AL1P0C617 328 aa12.33□□□□□ -0.44
NEDD1-208ENST00000555806 GNG4P50150 75 aa12.33□□□□□ -0.44
NEDD1-208ENST00000555806 DAZAP1Q96EP5 407 aaKnown RBP12.33□□□□□ -0.44
NEDD1-208ENST00000555806 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-208ENST00000555806 RAB19A4D1S5 217 aa12.32□□□□□ -0.44
NEDD1-208ENST00000555806 BCL2P10415 239 aa12.32□□□□□ -0.44
NEDD1-208ENST00000555806 RAB4BP61018 213 aa12.32□□□□□ -0.44
NEDD1-208ENST00000555806 DAZ4Q86SG3 579 aaKnown RBP12.32□□□□□ -0.44
NEDD1-208ENST00000555806 DAZ3Q9NR90 486 aaKnown RBP12.32□□□□□ -0.44
NEDD1-208ENST00000555806 MED9Q9NWA0 146 aa12.32□□□□□ -0.44
NEDD1-208ENST00000555806 URGCP-MRPS24S4R325 110 aa12.32□□□□□ -0.44
NEDD1-208ENST00000555806 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
NEDD1-208ENST00000555806 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
NEDD1-208ENST00000555806 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
NEDD1-208ENST00000555806 LRCOL1A6NCL2 159 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 F5H697 171 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 IGLV2-8P01709 118 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 SMIM17P0DL12 118 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 GZMBP10144 247 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 UBE2D3P61077 147 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 UBE2D2P62837 147 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 TOR2AQ5JU69 321 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 OR2D3Q8NGH3 330 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 VAX2Q9UIW0 290 aa12.3□□□□□ -0.44
NEDD1-208ENST00000555806 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 RPS20P60866 119 aaKnown RBP12.29□□□□□ -0.44
NEDD1-208ENST00000555806 NIT1Q86X76 327 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 Q8N1X5 172 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 OR10G8Q8NGN5 311 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 SMIM12Q96EX1 92 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 AP1S3Q96PC3 154 aa12.29□□□□□ -0.44
NEDD1-208ENST00000555806 ABCA13Q86UQ4 5058 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 IGLV5-52A0A0A0MRZ9 124 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 TAGLN2P37802 199 aaKnown RBP12.28□□□□□ -0.44
NEDD1-208ENST00000555806 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 NEXN-AS1Q8NBZ9 246 aa12.28□□□□□ -0.44
NEDD1-208ENST00000555806 A0A087WX48 190 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 C19orf71A6NCJ1 209 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 P01737 135 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 GCSHP23434 173 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 Q8N814 137 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.27□□□□□ -0.45
NEDD1-208ENST00000555806 BIN3Q9NQY0 253 aa12.27□□□□□ -0.45
NEDD1-208ENST00000555806 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
NEDD1-208ENST00000555806 XKRY2A2RUG3 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms