RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PSMB8P28062 276 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 DCHS2Q6V1P9 2916 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 ZNF815PA8K554 130 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 SPRY2O43597 315 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 CRYGDP07320 174 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 LRBAP50851 2863 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 TACC2O95359 2948 aa12.09□□□□□ -0.47
TUBB3-209ENST00000555609 IGHV4-30-2A0A087WSY4 118 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
TUBB3-209ENST00000555609 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
TUBB3-209ENST00000555609 RHOHQ15669 191 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 TP53TG1Q9Y2A0 90 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 C11orf86A6NJI1 115 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 CD7P09564 240 aa12.08□□□□□ -0.48
TUBB3-209ENST00000555609 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
TUBB3-209ENST00000555609 IGHV3-16A0A0C4DH30 117 aa12.07□□□□□ -0.48
TUBB3-209ENST00000555609 TSHBP01222 138 aa12.07□□□□□ -0.48
TUBB3-209ENST00000555609 Q6ZS46 218 aa12.07□□□□□ -0.48
TUBB3-209ENST00000555609 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
TUBB3-209ENST00000555609 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 A0A0J9YX75 114 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 SCGB1D4Q6XE38 83 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 LCNL1Q6ZST4 164 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-209ENST00000555609 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 UBE2D1P51668 147 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 BAHCC1Q9P281 2608 aa12.06□□□□□ -0.48
TUBB3-209ENST00000555609 DOPEY1Q5JWR5 2465 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 F5H697 171 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 K7EQG2 157 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 NSUN5P1Q3KNT7 163 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
TUBB3-209ENST00000555609 TRPT1Q86TN4 253 aaKnown RBP12.05□□□□□ -0.48
TUBB3-209ENST00000555609 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-209ENST00000555609 J3QLI3 93 aa12.04□□□□□ -0.48
TUBB3-209ENST00000555609 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
TUBB3-209ENST00000555609 HECTD1Q9ULT8 2610 aa12.04□□□□□ -0.48
TUBB3-209ENST00000555609 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
TUBB3-209ENST00000555609 SRD5A1P18405 259 aa12.04□□□□□ -0.48
TUBB3-209ENST00000555609 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
TUBB3-209ENST00000555609 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
TUBB3-209ENST00000555609 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
TUBB3-209ENST00000555609 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
TUBB3-209ENST00000555609 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
TUBB3-209ENST00000555609 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-209ENST00000555609 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
TUBB3-209ENST00000555609 H3BMG7 143 aa12.02□□□□□ -0.48
TUBB3-209ENST00000555609 M0QY20 66 aa12.02□□□□□ -0.48
TUBB3-209ENST00000555609 WFDC2Q14508 124 aa12.02□□□□□ -0.48
TUBB3-209ENST00000555609 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.48
TUBB3-209ENST00000555609 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.48
TUBB3-209ENST00000555609 TRGV11A0A075B6L2 103 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 A0A087WWL8 130 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 A0A0J9YY99 117 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 LINC01356Q8N9X3 169 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 JPT2Q9H910 190 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 MRPL16Q9NX20 251 aaKnown RBP12.02□□□□□ -0.49
TUBB3-209ENST00000555609 PGPEP1Q9NXJ5 209 aa12.02□□□□□ -0.49
TUBB3-209ENST00000555609 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
TUBB3-209ENST00000555609 AVPP01185 164 aa12.01□□□□□ -0.49
TUBB3-209ENST00000555609 ELANEP08246 267 aa12.01□□□□□ -0.49
TUBB3-209ENST00000555609 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
TUBB3-209ENST00000555609 DLX4Q92988 240 aaPredicted RBP12.01□□□□□ -0.49
TUBB3-209ENST00000555609 PLEKHB2Q96CS7 222 aa12.01□□□□□ -0.49
TUBB3-209ENST00000555609 MUC4Q99102 2169 aa12□□□□□ -0.49
TUBB3-209ENST00000555609 ZNF688P0C7X2 276 aa12□□□□□ -0.49
TUBB3-209ENST00000555609 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
TUBB3-209ENST00000555609 Q8N1Y9 231 aa12□□□□□ -0.49
TUBB3-209ENST00000555609 I3L3M4 83 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 EDN2P20800 178 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 RPL39P62891 51 aaKnown RBP11.99□□□□□ -0.49
TUBB3-209ENST00000555609 ZNF56Q15929 161 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 CENPEQ02224 2701 aa11.99□□□□□ -0.49
TUBB3-209ENST00000555609 A0A1B0GV72 72 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 LEPROTO15243 131 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 CRYBA4P53673 196 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 TMEM170BQ5T4T1 132 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 KLHL30-AS1Q8NEE0 82 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 SIGMAR1Q99720 223 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 AGRNO00468 2067 aa11.98□□□□□ -0.49
TUBB3-209ENST00000555609 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 UBE2D3P61077 147 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 UBE2D2P62837 147 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 CRYBG3Q68DQ2 2970 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 J3QQQ9 107 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms